Complex Systems Winter School 2015-Tutorials

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CSWS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials.

You can schedule your own tutorial here, they will be held informally during the evening. Please do not schedule during other CSWS Lectures.

Tutorials can be given in the Visitors Hostel Conference Room on level 2.

try to use this template:

Bare minimum of Fractals

Speaker: Sagar Chakraborty
Date & Time & Place:' Friday, 11 Dec at 9:30pm in 1st floor conference room.
Content: Improvising on Chapter-11 of Strogatz's book on non-linear dynamics. .
Motivation: Fractals are mathematical objects with precise definition. Plan is to motivate the need of introducing fractals using not-so-rigorous mathematics.
Prerequisite: Love for maths for maths' sake.
Slides: Chalk/Pen and Board only.
Interested Participants: Katrina, Chakresh, Srashti Goyal, Bhumika Thakur, Promit, Cory, Prateek, Aaron

Social Networks: Understanding aid work through relational ontologies

Speaker: Emily Lynch
Date & Time & Place:' Tuesday, December 15, 20h45 - 21h30 ; 2nd floor conference room.
Content: It is an open question for me how to understand humanitarian aid in terms of complex systems. I've just finished a paper proposing that the network position of the aid worker increases their capacity to influence information exchange between clustering communities. In the paper, I argue that there has been a recent shift of aid workers' network position in a way that is reducing humanitarian space - e.g. making aid work more dangerous. .
Motivation: I'd like to present some of the work I've done, and use this case study/example to brainstorm how what we have learned so far about complex systems could apply to questions in social science, particularly those about power, agency, knowledge production, etc.
Prerequisite: curiosity!
Slides: Chalk/Pen and Board only.
Interested: Isabel, Katrina, Chakresh, Bhumika, Saji, Cory, Pam, Prateek, Amanda

Single-cell gene expression analysis and stem cell differentiation

Speaker: Rhishikesh Bargaje, Aaron Taudt
Date & Time & Place: Wednesday, 16 December, 9:00pm, 2nd floor conference room.
Content: I will talk about recent advances in single-cell gene expression analysis. Currently, it's one of the hottest areas of research in biology. There are newer and newer methods/techniques being developed to generate and analyze such datasets. However, we still need advanced methods to derive meaningful, physiologically relevant information from such datasets. I will briefly introduce some of the different types of tools and techniques used in single-cell gene expression analysis. I also see that there is lot of interest in Stem cell research; in case there is enough motivation I can go through some of the basics of stem cell research.
Motivation: Majority of the tools that are being utilized for single-cell gene expression analysis are based on linear models. However, we know that most biological systems are not linear and you all are unique set of people that can bring newer insights to this field. So, I would like to sensitize you all to this new area.
Prerequisite: Beer!! (kidding of course). None.
Slides: I can share it on request.
Interested Participants: Rajesh, Sagar, Cory, Ria, Pam, Bhumika, Ravi, Amanda, Jeff

Turning Concepts Into Networks

Facilitator: Cory Cox
Date & Time & Place:' FRIDAY, 18 Dec at 9:30pm in 2nd floor conference room
Content: I will demonstrate what we do - at my startup - to help firms improve collaboration and communication. The goal is to show how you can build graphs/networks from purposively collected sociometric data (surveys for example) to measure concepts of interest. Goal is to give you a real world example and then talk about your own work to see how different approaches to data collection / graph construction can be used in your research. I am not the expert, just a facilitator... but together we can share ideas and generate some creative avenues for you to get started.' I also have a cloud solution for data collection and simple analysis that I would be happy to contribute to any collaborations anyone would like to do together. .
Motivation: Defining the network(s) and boundaries is difficult. And specifying exactly what a link between two nodes encodes about interactions or relations is not always intuitive.
Prerequisite: You are here... that's enough :)
Slides: I will post soon or after.
Interested Participants: Sagar, Chakresh, Bhumika, Rajesh, Aditya, Snehal,Srashti, Ben, Saji, Pam, Prateek, Ravi

Perspectives on Cancer Evolution and Stem Cell Biology

Speaker: Jeffrey Gerold, Rhishikesh Bargaje
Date & Time & Place: Saturday, Dec. 19, 7pm in the second floor conference room
Content: Jeff will give a (very) brief overview of cancer research with a focus on open problems. In particular, cancer as a patient-specific and evolving disease of the genome will be the central theme. Time permitting, recent developments in therapy directions and biotechnology tools will be discussed to give some sense of what the future of cancer research might hold. Rhishi will cover the basics of stem cell research, describe pluripotency and how differentiated adult cells can be turned back into stem cells (called induced pluripotent stem cells).
Motivation: Cancer progression and stem cell differentiation occur through distinct but related pathways. We want to introduce these complex systems in an accessible way.
Prerequisite: Familiarity with biology recommended
Slides: Available on request
Interested: Rajesh