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Complex Systems Summer School 2017-Projects & Working Groups

From Santa Fe Institute Events Wiki

Complex Systems Summer School 2017

suggestions from Jiří Moravec

Microbial Systems are Complex

Summary

Several of us seem to have shared interests in microbial ecology/evolution/genetics. It might be a good idea to meet up and brainstorm a project (maybe over beer?). Some potential ideas that were discussed during speed dating:

  • The evolution of the bacterial pangenome
  • Development/adaptation of classical population genetic techniques to microbes (maybe via a network describing HGT interactions)
  • The evolution of metabolism/the interaction between metabolism and community structure
  • How interspecific interactions (e.g. crossfeeding, competition) influence the rate of decay of community similarity in a homogeneous environment (scale of spatial organization)

Interested Participants

  • Jake Weissman (jw4336(at)umd.edu)


EU: responding to migrant crisis

Keywords

cooperation, migration, consensus-reaching, supranational unions

Summary

How does an organization of independent countries, such the European Union, deal with a migrant crisis? How can a consensus on a response be reached? Why did the EU fail to deal efficiently and fairly with the 2015 migrant crisis (>1m people)? Why isn’t the migrant quota system not working? (Or is it?)

Yes, these are all pretty big questions, but I believe very exciting and timely. Haven’t figured out details obviously, but I think these could be explored with agent based models (possibly NetLogo?). It would be particularly interesting to see how a few factors influence the chances that a consensus is reached and what type of consensus:

  • country on coast/external border vs landlocked
  • how far from coastal border
  • economic power
  • diplomatic power
  • Union organization: continuum - federal government can impose policies —> unanimous consensus must be reached every time

If you find this interesting, let’s meet up and discuss!

Group Contact

Alberto Micheletti (biology, social evolution, ajcm2[at]st-andrews[dot]ac[dot]uk)

Interested Participants


Gut-Brain Axis: Impact of gut microbiota on mental health

Keywords

public health, microbiome, metabolism, network analysis, neuroscience

Summary

The term "gut feeling" is not without a scientific basis. Recent literature has emphasized the connection between the brain and intestinal microbes. Studies are beginning to link neurodegenerative disorders, such as Alzheimer's disease and multiple sclerosis, to gut dysbioses.

Other relationships between the brain and the gut are waiting to be explored. Also, on a broader level, relationships between microbial metabolism and neurotransmitter levels could be investigated.

Open source data sets are available, such as the ones mentioned in this paper: bmcsystbiol.biomedcentral.com/articles/10.1186/s12918-016-0307-y

If you find this interesting, include your name and email on the list below

Interested Participants

Bleu Knight (bleu AT nmsu.edu; happylittleaccident AT gmail.com)

Some datasets that might trigger an idea

DataUSA - bunch of USA data (towns, cities, states, education, skills, occupations, industries...)

https://datausa.io

Pantheon - historical database of 'globally known people' with place and date of birth and death (not sure if it's publicly available though..)

http://pantheon.media.mit.edu