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	<updated>2026-04-05T19:26:47Z</updated>
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	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Photos&amp;diff=46880</id>
		<title>Complex Systems Summer School 2012-Photos</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Photos&amp;diff=46880"/>
		<updated>2012-06-28T21:14:07Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
==fossiliferous trip==&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Feel free to share links to your photos here.&lt;br /&gt;
&lt;br /&gt;
[http://www.flickr.com/photos/57132973@N07/7381727052/in/photostream/lightbox/ Tom tries to cut in]&lt;br /&gt;
&lt;br /&gt;
[http://www.flickr.com/photos/57132973@N07/7381727234/in/photostream/lightbox/ Tom is rebuffed]&lt;br /&gt;
&lt;br /&gt;
A photo of the transit of Venus across the Sun: [[Media:Venus-transit-2.jpg]]&lt;br /&gt;
&lt;br /&gt;
[http://www.dropbox.com/gallery/1694302/1/CSSS2012?h=0d4e88 Some pictures]&lt;br /&gt;
&lt;br /&gt;
[http://www.flickr.com/photos/sepehrehsani/7350419208/ Transit of Venus 2012]&lt;br /&gt;
&lt;br /&gt;
[http://www.flickr.com/photos/sepehrehsani/7165200933/ Dr. Hübler&#039;s wave chaos experiment]&lt;br /&gt;
&lt;br /&gt;
PHOTOS by Sanith&lt;br /&gt;
&lt;br /&gt;
[https://plus.google.com/photos/115406882267732059257/albums/5757705148934455361?authkey=CMrF3aSQt-3pVQ Trip to Mars (aka Kasha-Katuwe Tent Rocks)]&lt;br /&gt;
&lt;br /&gt;
[https://plus.google.com/photos/115406882267732059257/albums/5755568736830137233?authkey=CKGi15SL_O_LMg Taos ]&lt;br /&gt;
&lt;br /&gt;
[https://plus.google.com/photos/115406882267732059257/albums/5754491294229358321?authkey=CNzp1fLU2o-B2gE SFI ]&lt;br /&gt;
&lt;br /&gt;
[https://www.dropbox.com/sh/twbymjcgkgqf7do/BFwDl5OyHv Friederike&#039;s pictures]&lt;br /&gt;
&lt;br /&gt;
more pictures [https://www.dropbox.com/sh/u162yq7vyhfzm4e/uFTIcqdWyw]&lt;br /&gt;
&lt;br /&gt;
St John&#039;s pictures [https://www.dropbox.com/home/Public/St%20Johns%20College]&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Presentations_2012&amp;diff=46834</id>
		<title>Presentations 2012</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Presentations_2012&amp;diff=46834"/>
		<updated>2012-06-27T18:19:00Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
&amp;lt;b&amp;gt;9:00 - 9:15:&amp;lt;/b&amp;gt; Christa Brelsford and Xin Lu: Changes in Social Network Structure in Response to Crisis: Using Twitter data to Explore the Effect of the Tōhoku Earthquake.&lt;br /&gt;
&lt;br /&gt;
&amp;lt;b&amp;gt;9:15 - 9:30:&amp;lt;/b&amp;gt; Piotr Milanowski and Georg F. Weber: Enzyme kinetics and the outcome of chemical reactions. &lt;br /&gt;
&lt;br /&gt;
10:15 - 10:45: BREAK&lt;br /&gt;
&lt;br /&gt;
12:00 - 1:15: LUNCH&lt;br /&gt;
&lt;br /&gt;
5:00: Final Remarks &amp;amp; Farewell Dinner&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Blog&amp;diff=46812</id>
		<title>Complex Systems Summer School 2012-Blog</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Blog&amp;diff=46812"/>
		<updated>2012-06-27T05:24:20Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
Use this page as an informal forum to share your opinion and discuss anything at CSSS&#039;12.&lt;br /&gt;
&lt;br /&gt;
Students are encouraged to share their observations, insights, and opinions about daily lecture content as well as extracurricular activities. &lt;br /&gt;
&lt;br /&gt;
Post your own links to notes, interesting articles, and anything else you think might contribute to the program.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== On the physicists&#039; approach to other disciplines ==&lt;br /&gt;
&lt;br /&gt;
http://www.smbc-comics.com/comics/20120321.gif&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Experiment Sign-up ==&lt;br /&gt;
&lt;br /&gt;
http://tuvalu.santafe.edu/events/workshops/index.php/Experiment_sign-up&lt;br /&gt;
&lt;br /&gt;
== Can one get a chaotic map with two disco balls? ==&lt;br /&gt;
&lt;br /&gt;
And, if so, isn&#039;t it practically our duty to do so? &lt;br /&gt;
&lt;br /&gt;
(There&#039;s a disco ball in the lecture hall.)&lt;br /&gt;
&lt;br /&gt;
== Schooling interactions with non-square boundary == &lt;br /&gt;
The Monterey Bay Aquarium has an [http://www.youtube.com/watch?v=xZKxfvi9h0c [anchovy tank]] shaped like two nested sections of cones (you stand inside it). Boid-like behavior is pretty easy to see in the fish, particularly because the shape of the tank interferes with the school. I couldn&#039;t decide if the tank was actually inducing turbulence in the fish.&lt;br /&gt;
&lt;br /&gt;
== Dynamical Systems: R and Python ==&lt;br /&gt;
I wrote some Python code for simulating deterministic dynamical systems and used it to play around with the Logistic map from yesterday&#039;s lectures.  The Python class I wrote for simulating generic dynamical systems (admittedly only those with a single state variable!) can be found [https://sites.google.com/site/beyondmicrofoundationscoderepo/home/python/dynamics here] (I would have posted to the code to the wiki directly but apparently one cannot upload .py files).  I have also written a [http://beyondmicrofoundations.blogspot.com/2012/06/monday-4-june-2012-at-2012-csss.html blog] post demonstrating some of the functionality of the Python code.&lt;br /&gt;
&lt;br /&gt;
Also, there are several R packages that seem to implement the algorithms from the TISEAN program that we were introduced to yesterday.  The packages are [http://cran.r-project.org/web/packages/RTisean/index.html RTisean], [http://cran.r-project.org/web/packages/tseriesChaos/index.html tseriesChaos], and [http://cran.r-project.org/web/packages/tsDyn/index.html tsDyn] and can be found on CRAN.&lt;br /&gt;
&lt;br /&gt;
Enjoy,&lt;br /&gt;
&lt;br /&gt;
D. Pugh&lt;br /&gt;
&lt;br /&gt;
PS: I am very much a newbie to Python, and any suggestions on improving my coding are much appreciated!&lt;br /&gt;
&lt;br /&gt;
I have written another blog [http://beyondmicrofoundations.blogspot.com/2012/06/5-6-june-2012-at-2012-csss.html post] and some more Python code for implementing parts of the TISEAN labs that we have been assigned.  Code can be found here [https://sites.google.com/site/beyondmicrofoundationscoderepo/home/python/dynamics here].  Eventually, the code will contain solutions to the all of the labs and homework.&lt;br /&gt;
&lt;br /&gt;
== Python wrapper for TISEAN ==&lt;br /&gt;
&lt;br /&gt;
Thanks for sharing your python code David. &lt;br /&gt;
&lt;br /&gt;
Incidentally there is also a Python wrapper for TISEAN available&lt;br /&gt;
[http://www.stud.fernuni-hagen.de/q4576411/andreas_2/computer/projekte/tisean.html here]. Not sure how good it is, but might be worth checking out.&lt;br /&gt;
&lt;br /&gt;
Sanith&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Project_Presentations&amp;diff=46801</id>
		<title>Complex Systems Summer School 2012-Project Presentations</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Project_Presentations&amp;diff=46801"/>
		<updated>2012-06-26T23:24:21Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
Use this space to post project presentations and outlines. Include group members, a brief outline, and your slides.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== Price-time Dynamics of Contracts Traded on Prediction Markets ===&lt;br /&gt;
&lt;br /&gt;
Joanne, Vikram, Matteo, Sanith&lt;br /&gt;
&lt;br /&gt;
Prediction markets have been shown to outperform traditional methods of polls and opinion surveys in forecasting future events. The futures contracts traded in these markets assess the expectation of occurrence of a variety of events spread across multiple domains (political, economic, entertainment, financial and weather). We explore the feasibility of &#039;predicting&#039; the outcome of binary true/false prediction market contracts ahead of their expiry date using a neural-network based machine learning approach. In addition we focus on the characteristics of political-based contracts to establish whether they exhibit characteristic &#039;fundamental&#039; properties.&lt;br /&gt;
&lt;br /&gt;
=== How Complex Languages Replicate through Simple Brains ===&lt;br /&gt;
&lt;br /&gt;
Katrien, Vanessa, Sandro, Cameron, Jasmeen&lt;br /&gt;
&lt;br /&gt;
Through the use of an iterated learning experiment, we investigated the transmission of a &amp;quot;high entropy&amp;quot;, randomised initial language through successive generations of participants. We want to see what features of the language replicated most easily, and what structure emerged by the end of the chain. Our hypothesis is that the language converges to a &amp;quot;low entropy&amp;quot; equilibrium state with a minimal number of words, morphemes, and form-meaning distinctions.&lt;br /&gt;
&lt;br /&gt;
=== Collaboration in times of stress: an Agent Based Modelling approach  ===&lt;br /&gt;
&lt;br /&gt;
Fabio Cresto Aleina, Elena del Val, Tom Fennewald and Friederike Greb &lt;br /&gt;
&lt;br /&gt;
We want to investigate the influence of exogenous stress on cooperative behaviour. We propose an agent based model in which the agents can be interpreted as farmers living in a water limited environment. With changes in precipitation patterns, the farmers undergo stress, and we observe how this impacts relationships among farmers and their properties.&lt;br /&gt;
&lt;br /&gt;
=== Simple variation of the logistic map as a model to invoke questions on cellular protein trafficking ===&lt;br /&gt;
(Sepehr Ehsani, http://arxiv.org/abs/1206.5557)&lt;br /&gt;
&lt;br /&gt;
Many open problems in biology, as in the physical sciences, display nonlinear and &#039;chaotic&#039; dynamics, which, to the extent possible, cannot be reasonably understood. Moreover, mathematical models which aim to predict/estimate unknown aspects of a biological system cannot provide more information about the set of biologically meaningful (e.g., &#039;hidden&#039;) states of the system than could be understood by the designer of the model ab initio. Here, the case is made for the utilization of such models to shift from a &#039;predictive&#039; to a &#039;questioning&#039; nature, and a simple natural-logarithm variation of the logistic polynomial map is presented that can invoke questions about protein trafficking in eukaryotic cells.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
===Changes in Social Network Structure in Response to Crisis: Using Twitter data to Explore the Effect of the Tōhoku Earthquake.===&lt;br /&gt;
&lt;br /&gt;
Christa Brelsford and Xin Lu&lt;br /&gt;
&lt;br /&gt;
Abstract:&lt;br /&gt;
We use twitter data from 7 days before and after the Tōhoku Earthquake to explore how cooperation rates, social network structure and connectivity, and social network vulnerability changed in Japan in response to the disaster.  An English language data set is collected for the same time period to use as a control.  Data is collected for a period of 96 hours starting from March 4th 2011 2:46pm JST and for 96 hours beginning March 11th 2011 2:46 pm JST.  The rate of cooperative behavior, measured by the occurrence of helping words in tweets increases slightly in the English dataset and by an order of magnitude in the Japanese dataset.  A network analysis is also performed. Network edges are retweets and direct messages.  In future work, we hope to explore whether problem solving capacity in a social system changes in response to crises, based on changes in the rate of cooperation and information transfer in a network.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== The CSSS Network  ===&lt;br /&gt;
&lt;br /&gt;
Tom &amp;amp; Riccardo (with JP and others)&lt;br /&gt;
&lt;br /&gt;
We will investigate the questions you are dying to know: What interesting interactions are revealed from the first 3 weeks of the Complex System Summer School survey?  Have barriers between academic disciplines been broken down?  Do power laws fit the data!? ...&lt;br /&gt;
&lt;br /&gt;
Let us know if you have specific questions or if you would like to be involved in data analysis!&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== Is there a method in the madness? the dynamic structures of human language use ===&lt;br /&gt;
&lt;br /&gt;
Priya and Riccardo&lt;br /&gt;
&lt;br /&gt;
Psychiatric anecdotal reports point to the monotony, lack of emotion and sometimes intelligibility in many clinical populations. Linear measures of fluency and prosody, however, present only controversial differences between patients and healthy controls and only in unnatural phonations (i.e. say &amp;quot;aaaaa&amp;quot; for 30 secs).&lt;br /&gt;
We therefore go complex and chaotic on a set of more ecological recordings and transcriptions from 4 clinical populations (Asperger&#039;s, Schizophrenics, Depressed and Right Hemisphere Damage patients) as well as from healthy controls.&lt;br /&gt;
We then set a classifier-driven race: will non-linear analyses outcompete linear analyses in discriminating between pathologies?&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== Escaping the Poverty Trap: Modeling the Interplay Between Economic Growth and the Ecology of Infectious Disease ===&lt;br /&gt;
&lt;br /&gt;
Georg, Ben, Laurent, Oscar&lt;br /&gt;
&lt;br /&gt;
The dynamics of economies and infectious disease are inexorably linked: economic well-being influences health (sanitation, nutrition, etc) and health influences economic well-being (labor productivity lost to sickness and disease). Often societies are locked into &amp;quot;poverty traps&amp;quot; of poor health and poor economy. Here, we demonstrate poverty traps formed in models of infection and endogenous growth, as well as ways to break out of poverty traps. We explore two mechanisms of escape: one, through an influx of capital, and another through changing the percentage of GDP spent on healthcare. We find large influxes of capital is successful, but increasing health spending does not. Our results have important policy implications in the distribution of aid and within-country healthcare spending.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== The Targeting and Timing of Treatment Influences the Emergence of Influenza Resistance in Structured Populations ===&lt;br /&gt;
&lt;br /&gt;
Ben, Laurent, Oscar, Georg&lt;br /&gt;
&lt;br /&gt;
Evolution of antiviral resistance in influenza carries large societal impacts through morbidity and mortality caused by treatment failure. Several previous studies put forth theory regarding the optimal timing, targeting and absolute level of treatment in populations. Few of these studies, however, have considered populations with explicit structure. Here we present a model of antiviral resistance on networks and explore the timing, targeting and levels of treatment. Interestingly, we find bistability as a result of treatment leading to the existence of an unstable manifold, above which successful treatment (i.e.: no resistance) is impossible. We find, contrary to previous results, that degree-targeted treatment is not optimal, and leads to higher levels of resistance than random treatment. Additionally, in accordance with previous results, we find an optimum level of treatment which is less than 100%. These findings findings have important consequences in guiding policy behind influenza treatment. The bistability indicates that caution should be taken when treating populations when the absolute numbers of infections are unknown. Positively, our results indicate that putting resources into targeted treatment is not necessary, random treatment is preferable.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== Learning in Random Boolean Networks ===&lt;br /&gt;
&lt;br /&gt;
Nick A., Keegan, Matteo, Vikram, Sarah, Mark&lt;br /&gt;
&lt;br /&gt;
Inspired by biochemical networks which adapt on evolutionary timescales, neural networks that adapt during development and learning,  and universal computation in cellular automata, we have implemented several models of learning in Random Boolean Networks (RBNs) in order to better understand the relationships between network structure, node interaction rules, and network output.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== Enzyme Catalysis and the Outcome of Chemical Reactions ===&lt;br /&gt;
Piotr and Georg W.&lt;br /&gt;
Enzymes are catalysts that accelerate chemical reactions but do not affect their outcome. This traditional paradism was developed under artificail test tube conditions. Our project investigates the possibility that the presence of an enzyme can alter the course of a reaction if it takes place under more physiologic conditions.&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Project_Presentations&amp;diff=46800</id>
		<title>Complex Systems Summer School 2012-Project Presentations</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Project_Presentations&amp;diff=46800"/>
		<updated>2012-06-26T23:22:10Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
Use this space to post project presentations and outlines. Include group members, a brief outline, and your slides.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== Price-time Dynamics of Contracts Traded on Prediction Markets ===&lt;br /&gt;
&lt;br /&gt;
Joanne, Vikram, Matteo, Sanith&lt;br /&gt;
&lt;br /&gt;
Prediction markets have been shown to outperform traditional methods of polls and opinion surveys in forecasting future events. The futures contracts traded in these markets assess the expectation of occurrence of a variety of events spread across multiple domains (political, economic, entertainment, financial and weather). We explore the feasibility of &#039;predicting&#039; the outcome of binary true/false prediction market contracts ahead of their expiry date using a neural-network based machine learning approach. In addition we focus on the characteristics of political-based contracts to establish whether they exhibit characteristic &#039;fundamental&#039; properties.&lt;br /&gt;
&lt;br /&gt;
=== How Complex Languages Replicate through Simple Brains ===&lt;br /&gt;
&lt;br /&gt;
Katrien, Vanessa, Sandro, Cameron, Jasmeen&lt;br /&gt;
&lt;br /&gt;
Through the use of an iterated learning experiment, we investigated the transmission of a &amp;quot;high entropy&amp;quot;, randomised initial language through successive generations of participants. We want to see what features of the language replicated most easily, and what structure emerged by the end of the chain. Our hypothesis is that the language converges to a &amp;quot;low entropy&amp;quot; equilibrium state with a minimal number of words, morphemes, and form-meaning distinctions.&lt;br /&gt;
&lt;br /&gt;
=== Collaboration in times of stress: an Agent Based Modelling approach  ===&lt;br /&gt;
&lt;br /&gt;
Fabio Cresto Aleina, Elena del Val, Tom Fennewald and Friederike Greb &lt;br /&gt;
&lt;br /&gt;
We want to investigate the influence of exogenous stress on cooperative behaviour. We propose an agent based model in which the agents can be interpreted as farmers living in a water limited environment. With changes in precipitation patterns, the farmers undergo stress, and we observe how this impacts relationships among farmers and their properties.&lt;br /&gt;
&lt;br /&gt;
=== Simple variation of the logistic map as a model to invoke questions on cellular protein trafficking ===&lt;br /&gt;
(Sepehr Ehsani, http://arxiv.org/abs/1206.5557)&lt;br /&gt;
&lt;br /&gt;
Many open problems in biology, as in the physical sciences, display nonlinear and &#039;chaotic&#039; dynamics, which, to the extent possible, cannot be reasonably understood. Moreover, mathematical models which aim to predict/estimate unknown aspects of a biological system cannot provide more information about the set of biologically meaningful (e.g., &#039;hidden&#039;) states of the system than could be understood by the designer of the model ab initio. Here, the case is made for the utilization of such models to shift from a &#039;predictive&#039; to a &#039;questioning&#039; nature, and a simple natural-logarithm variation of the logistic polynomial map is presented that can invoke questions about protein trafficking in eukaryotic cells.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
===Changes in Social Network Structure in Response to Crisis: Using Twitter data to Explore the Effect of the Tōhoku Earthquake.===&lt;br /&gt;
&lt;br /&gt;
Christa Brelsford and Xin Lu&lt;br /&gt;
&lt;br /&gt;
Abstract:&lt;br /&gt;
We use twitter data from 7 days before and after the Tōhoku Earthquake to explore how cooperation rates, social network structure and connectivity, and social network vulnerability changed in Japan in response to the disaster.  An English language data set is collected for the same time period to use as a control.  Data is collected for a period of 96 hours starting from March 4th 2011 2:46pm JST and for 96 hours beginning March 11th 2011 2:46 pm JST.  The rate of cooperative behavior, measured by the occurrence of helping words in tweets increases slightly in the English dataset and by an order of magnitude in the Japanese dataset.  A network analysis is also performed. Network edges are retweets and direct messages.  In future work, we hope to explore whether problem solving capacity in a social system changes in response to crises, based on changes in the rate of cooperation and information transfer in a network.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== The CSSS Network  ===&lt;br /&gt;
&lt;br /&gt;
Tom &amp;amp; Riccardo (with JP and others)&lt;br /&gt;
&lt;br /&gt;
We will investigate the questions you are dying to know: What interesting interactions are revealed from the first 3 weeks of the Complex System Summer School survey?  Have barriers between academic disciplines been broken down?  Do power laws fit the data!? ...&lt;br /&gt;
&lt;br /&gt;
Let us know if you have specific questions or if you would like to be involved in data analysis!&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== Is there a method in the madness? the dynamic structures of human language use ===&lt;br /&gt;
&lt;br /&gt;
Priya and Riccardo&lt;br /&gt;
&lt;br /&gt;
Psychiatric anecdotal reports point to the monotony, lack of emotion and sometimes intelligibility in many clinical populations. Linear measures of fluency and prosody, however, present only controversial differences between patients and healthy controls and only in unnatural phonations (i.e. say &amp;quot;aaaaa&amp;quot; for 30 secs).&lt;br /&gt;
We therefore go complex and chaotic on a set of more ecological recordings and transcriptions from 4 clinical populations (Asperger&#039;s, Schizophrenics, Depressed and Right Hemisphere Damage patients) as well as from healthy controls.&lt;br /&gt;
We then set a classifier-driven race: will non-linear analyses outcompete linear analyses in discriminating between pathologies?&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== Escaping the Poverty Trap: Modeling the Interplay Between Economic Growth and the Ecology of Infectious Disease ===&lt;br /&gt;
&lt;br /&gt;
Georg, Ben, Laurent, Oscar&lt;br /&gt;
&lt;br /&gt;
The dynamics of economies and infectious disease are inexorably linked: economic well-being influences health (sanitation, nutrition, etc) and health influences economic well-being (labor productivity lost to sickness and disease). Often societies are locked into &amp;quot;poverty traps&amp;quot; of poor health and poor economy. Here, we demonstrate poverty traps formed in models of infection and endogenous growth, as well as ways to break out of poverty traps. We explore two mechanisms of escape: one, through an influx of capital, and another through changing the percentage of GDP spent on healthcare. We find large influxes of capital is successful, but increasing health spending does not. Our results have important policy implications in the distribution of aid and within-country healthcare spending.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== The Targeting and Timing of Treatment Influences the Emergence of Influenza Resistance in Structured Populations ===&lt;br /&gt;
&lt;br /&gt;
Ben, Laurent, Oscar, Georg&lt;br /&gt;
&lt;br /&gt;
Evolution of antiviral resistance in influenza carries large societal impacts through morbidity and mortality caused by treatment failure. Several previous studies put forth theory regarding the optimal timing, targeting and absolute level of treatment in populations. Few of these studies, however, have considered populations with explicit structure. Here we present a model of antiviral resistance on networks and explore the timing, targeting and levels of treatment. Interestingly, we find bistability as a result of treatment leading to the existence of an unstable manifold, above which successful treatment (i.e.: no resistance) is impossible. We find, contrary to previous results, that degree-targeted treatment is not optimal, and leads to higher levels of resistance than random treatment. Additionally, in accordance with previous results, we find an optimum level of treatment which is less than 100%. These findings findings have important consequences in guiding policy behind influenza treatment. The bistability indicates that caution should be taken when treating populations when the absolute numbers of infections are unknown. Positively, our results indicate that putting resources into targeted treatment is not necessary, random treatment is preferable.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== Learning in Random Boolean Networks ===&lt;br /&gt;
&lt;br /&gt;
Nick A., Keegan, Matteo, Vikram, Sarah, Mark&lt;br /&gt;
&lt;br /&gt;
Inspired by biochemical networks which adapt on evolutionary timescales, neural networks that adapt during development and learning,  and universal computation in cellular automata, we have implemented several models of learning in Random Boolean Networks (RBNs) in order to better understand the relationships between network structure, node interaction rules, and network output.&lt;br /&gt;
&lt;br /&gt;
=== Enzyme Catalysis and the Outcome of Chemical Reactions ===&lt;br /&gt;
Piotr and Georg W.&lt;br /&gt;
Enzymes are catalysts that accelerate chemical reactions but do not affect their outcome. This traditional paradism was developed under artificail test tube conditions. Our project investigates the possibility that the presence of an enzyme can alter the course of a reaction if it takes place under more physiologic conditions.&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Photos&amp;diff=46752</id>
		<title>Complex Systems Summer School 2012-Photos</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Photos&amp;diff=46752"/>
		<updated>2012-06-25T03:48:36Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
Feel free to share links to your photos here.&lt;br /&gt;
&lt;br /&gt;
[http://www.flickr.com/photos/57132973@N07/7381727052/in/photostream/lightbox/ Tom tries to cut in]&lt;br /&gt;
&lt;br /&gt;
[http://www.flickr.com/photos/57132973@N07/7381727234/in/photostream/lightbox/ Tom is rebuffed]&lt;br /&gt;
&lt;br /&gt;
A photo of the transit of Venus across the Sun: [[Media:Venus-transit-2.jpg]]&lt;br /&gt;
&lt;br /&gt;
[http://www.dropbox.com/gallery/1694302/1/CSSS2012?h=0d4e88 Some pictures]&lt;br /&gt;
&lt;br /&gt;
[http://www.flickr.com/photos/sepehrehsani/7350419208/ Transit of Venus 2012]&lt;br /&gt;
&lt;br /&gt;
[http://www.flickr.com/photos/sepehrehsani/7165200933/ Dr. Hübler&#039;s wave chaos experiment]&lt;br /&gt;
&lt;br /&gt;
PHOTOS by Sanith&lt;br /&gt;
&lt;br /&gt;
[https://plus.google.com/photos/115406882267732059257/albums/5755568736830137233?authkey=CKGi15SL_O_LMg 06/17/12 Taos ]&lt;br /&gt;
&lt;br /&gt;
[https://plus.google.com/photos/115406882267732059257/albums/5754491294229358321?authkey=CNzp1fLU2o-B2gE 06/08/12 SFI ]&lt;br /&gt;
&lt;br /&gt;
[https://www.dropbox.com/sh/twbymjcgkgqf7do/BFwDl5OyHv Friederike&#039;s pictures]&lt;br /&gt;
&lt;br /&gt;
more pictures [https://www.dropbox.com/sh/u162yq7vyhfzm4e/uFTIcqdWyw]&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Tutorials&amp;diff=46573</id>
		<title>Complex Systems Summer School 2012-Tutorials</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Tutorials&amp;diff=46573"/>
		<updated>2012-06-19T01:35:48Z</updated>

		<summary type="html">&lt;p&gt;WeberG: /* Intro to Philosophy of Science */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials. &lt;br /&gt;
&lt;br /&gt;
Also, please post requests for tutorials here.&lt;br /&gt;
&lt;br /&gt;
==Non-linear measures of correlation==&lt;br /&gt;
&lt;br /&gt;
I have been working on how to quantify the reciprocal interaction of time-series over time. I am using Recurrence Plots (http://www.recurrence-plot.tk/glance.php). If anybody is interested in discussing this method, I am willing to prepare a small tutorial on what recurrence plots are and how I have been using them.&lt;br /&gt;
&lt;br /&gt;
Riccardo (fusaroli@gmail.com)&lt;br /&gt;
&lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
- Oleksandr krystoferivanov@gmail.com&lt;br /&gt;
&lt;br /&gt;
==Intro to Philosophy of Science==&lt;br /&gt;
&lt;br /&gt;
Hi All, I&#039;ve heard some interest in having a more structured/rigorous intro to ideas in the philosophy of science. I&#039;d be happy to briefly explain some of the classic theories as well as some more recent views due to, e.g. Bas Van Fraassen, James Ladyman, Nancy Cartwright, and we could have a small (moderated!) group discussion. Sign up if interested...   -Jasmeen&lt;br /&gt;
&lt;br /&gt;
- Hide is interested and has a crush on Engels&lt;br /&gt;
&lt;br /&gt;
- Friederike&lt;br /&gt;
&lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
- Vikram&lt;br /&gt;
&lt;br /&gt;
- Mikkel&lt;br /&gt;
&lt;br /&gt;
- Mark (!)&lt;br /&gt;
&lt;br /&gt;
-Keegan is down&lt;br /&gt;
&lt;br /&gt;
-Xiaoli&lt;br /&gt;
&lt;br /&gt;
- Georg W.&lt;br /&gt;
&lt;br /&gt;
==Markov Chain Monte Carlo==&lt;br /&gt;
If anyone is interested in talking more about Bayesian methods and MCMC implementation, I&#039;d be happy to put something together. - Keegan&lt;br /&gt;
&lt;br /&gt;
-Hide is interested in this!&lt;br /&gt;
&lt;br /&gt;
-Abby&lt;br /&gt;
&lt;br /&gt;
-Joanne&lt;br /&gt;
&lt;br /&gt;
-Oscar&lt;br /&gt;
&lt;br /&gt;
-Vanessa&lt;br /&gt;
&lt;br /&gt;
-Jasmeen&lt;br /&gt;
&lt;br /&gt;
-Georg&lt;br /&gt;
&lt;br /&gt;
-Nona&lt;br /&gt;
&lt;br /&gt;
-benji&lt;br /&gt;
&lt;br /&gt;
-Riccardo&lt;br /&gt;
&lt;br /&gt;
-Matteo&lt;br /&gt;
&lt;br /&gt;
-Xiaoli&lt;br /&gt;
&lt;br /&gt;
- Vikram&lt;br /&gt;
&lt;br /&gt;
==Python, Computational Mechanics, and Information Theory==&lt;br /&gt;
&lt;br /&gt;
There has been interest in more discussion on a number of topics, and so i&#039;m offering to have evening discussions on them. please sign up below so that i can get a feel for the number of people who would be attending. also, please put a preference for what day it should be.&lt;br /&gt;
&lt;br /&gt;
===Python===&lt;br /&gt;
Sign up below if you&#039;d like an introduction to basic python programming. Python is a general purpose, very flexible and useful programming language. It is used pretty extensively in scientific computing.&lt;br /&gt;
&lt;br /&gt;
dan wu: wu12345@gmail.com Let me know when we&#039;re meeting&lt;br /&gt;
&lt;br /&gt;
- Benji: bzusman@gmail.com &amp;lt;/p&amp;gt;&lt;br /&gt;
&lt;br /&gt;
-Keegan keegan.hines@gmail.com&lt;br /&gt;
&lt;br /&gt;
-Christa (maybe- I&#039;m competent at the very basics, but could still use some help)&lt;br /&gt;
&lt;br /&gt;
- Riccardo: fusaroli@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Oleksandr: krystoferivanov@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Nona: nona.karalashvili@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Xiaoli: xiaolidong2008@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Abby: Abbyhorn@Mit.edu&lt;br /&gt;
&lt;br /&gt;
- Marco: maduenase@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Nick: goudemand at pim dot uzh dot ch&lt;br /&gt;
&lt;br /&gt;
- Fabio: fabio.cresto-aleina@zmaw.de&lt;br /&gt;
&lt;br /&gt;
- Joanne: joannerodrigues@berkeley.edu&lt;br /&gt;
&lt;br /&gt;
- Hide: hi55 at cornell dot edu&lt;br /&gt;
&lt;br /&gt;
- Priya: iitm.priya@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Miguel: miguel.lurgi@icm.csic.es&lt;br /&gt;
&lt;br /&gt;
- Oscar: opatters@asu.edu&lt;br /&gt;
&lt;br /&gt;
- Vanessa: vanferdi at gmail dot com&lt;br /&gt;
&lt;br /&gt;
- Georg G: gmg at stat dot cmu dot edu dot notthelastpart&lt;br /&gt;
&lt;br /&gt;
- Oleksandr: krystoferivanov@gmail.com&lt;br /&gt;
&lt;br /&gt;
===Information Theory===&lt;br /&gt;
Interested in turning your data into bits, or seeing how the bits over there are related to the bits over here? If so, sign up below.&lt;br /&gt;
&lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
- Benji: bzusman@gmail.com&lt;br /&gt;
&lt;br /&gt;
-Keegan keegan.hines@gmail.com&lt;br /&gt;
&lt;br /&gt;
-Riccardo&lt;br /&gt;
&lt;br /&gt;
-Christa&lt;br /&gt;
&lt;br /&gt;
- Katrien&lt;br /&gt;
&lt;br /&gt;
- Xiaoli&lt;br /&gt;
&lt;br /&gt;
- Abby&lt;br /&gt;
 &lt;br /&gt;
- Jasmeen&lt;br /&gt;
&lt;br /&gt;
- Hide&lt;br /&gt;
&lt;br /&gt;
- Sanith&lt;br /&gt;
&lt;br /&gt;
- Priya&lt;br /&gt;
&lt;br /&gt;
- Georg W.&lt;br /&gt;
&lt;br /&gt;
- Piotr&lt;br /&gt;
&lt;br /&gt;
- Miguel&lt;br /&gt;
&lt;br /&gt;
- Oscar&lt;br /&gt;
&lt;br /&gt;
- Vanessa&lt;br /&gt;
&lt;br /&gt;
- Nona&lt;br /&gt;
&lt;br /&gt;
- Georg G.&lt;br /&gt;
&lt;br /&gt;
- Oleksandr krystoferivanov@gmail.com&lt;br /&gt;
&lt;br /&gt;
===Computational Mechanics===&lt;br /&gt;
If you&#039;d like to know more about epsilon machines, measures of complexity, how to go from a map to a machine, i&#039;m happy to discuss it all. &amp;lt;br&amp;gt; &lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
Yes please! --Chloe&lt;br /&gt;
&lt;br /&gt;
-Keegan keegan.hines@gmail.com&lt;br /&gt;
&lt;br /&gt;
-Christa&lt;br /&gt;
&lt;br /&gt;
-Xiaoli&lt;br /&gt;
&lt;br /&gt;
-Jasmeen&lt;br /&gt;
&lt;br /&gt;
-Hide&lt;br /&gt;
&lt;br /&gt;
-Sanith&lt;br /&gt;
&lt;br /&gt;
- Priya&lt;br /&gt;
&lt;br /&gt;
- Georg W.&lt;br /&gt;
&lt;br /&gt;
-Piotr&lt;br /&gt;
&lt;br /&gt;
-Ian&lt;br /&gt;
&lt;br /&gt;
- Miguel&lt;br /&gt;
&lt;br /&gt;
- Oscar&lt;br /&gt;
&lt;br /&gt;
- Abby&lt;br /&gt;
&lt;br /&gt;
- Georg G.&lt;br /&gt;
&lt;br /&gt;
- Riccardo. &lt;br /&gt;
&lt;br /&gt;
==Order Book Dynamics: Learn how to trade in 15min==&lt;br /&gt;
&lt;br /&gt;
--I&#039;m happy to repeat this -just get in touch with me.--&lt;br /&gt;
&lt;br /&gt;
If you are curious about how stocks trade and want to try your luck, I&#039;ll&lt;br /&gt;
be going over some of the basics with a hands-on example.&lt;br /&gt;
&lt;br /&gt;
Meet at 7.30pm in main lecture hall Thursday June 7th. Please make sure&lt;br /&gt;
to bring your laptop.&lt;br /&gt;
&lt;br /&gt;
Sanith&lt;br /&gt;
&lt;br /&gt;
==Update==&lt;br /&gt;
&lt;br /&gt;
Hi guys&lt;br /&gt;
&lt;br /&gt;
I guess the mail lecture hall is free at 6.30 pm and so we can meet there. I have a small talk through the idea and then maybe we can try out getting bifurcation plots for one or two systems. I use software written in MATLAB for the demo but the idea can be implemented in any software. &lt;br /&gt;
&lt;br /&gt;
Here&#039;s a link to the [[software for numerical continuation|http://twr.cs.kuleuven.be//research/software/delay/notice.shtml]]. This software can handle systems with time delays and can be used to obtain the bifurcation behaviour. &lt;br /&gt;
&lt;br /&gt;
(1)	Please download the software DDE-BIFTOOL and unzip. &lt;br /&gt;
&lt;br /&gt;
(2)	Within the folder, you will find another zipped folder in small case ‘ddebiftool’. Please unzip this into a folder with the same name&lt;br /&gt;
&lt;br /&gt;
(3)	Add the location of the folder to the path of MATLAB. &lt;br /&gt;
I have also sent out a mail with a zipped folder containing files to get a bifurcation plot for a Rijke tube system. &lt;br /&gt;
Do let me know if anyone did not get this. &lt;br /&gt;
See you there!&lt;br /&gt;
&lt;br /&gt;
Priya&lt;br /&gt;
&lt;br /&gt;
==An easier way to get a bifurcation plot==&lt;br /&gt;
&lt;br /&gt;
Hey guys&lt;br /&gt;
I have been working in the past in obtaining bifurcation plots for different physical systems. There&#039;s a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called &#039;&#039;numerical continuation&#039;&#039; and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at &#039;&#039;&#039;iitm.priya@gmail.com&#039;&#039;&#039; or sign up below. &lt;br /&gt;
[[User:Priya|Priya]]&lt;br /&gt;
&lt;br /&gt;
- [[Ryan James|Ryan]] is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Riccardo is interested in this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Vikram is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Matteo is interested in this.&amp;lt;br&amp;gt; &lt;br /&gt;
- Hide is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Katrien wants to hear more about this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Cameron is interested in this and would like to see [http://itunes.apple.com/us/app/xpp/id433859546?mt=8 this] in action if anyone has an iPad. &amp;lt;br&amp;gt;&lt;br /&gt;
- Oscar is interested in this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Charlie is interested in this. (I&#039;ve done this once for a paper.) &amp;lt;br&amp;gt;&lt;br /&gt;
- Georg W. is interested in this &amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Using Tisean on R on OS X==&lt;br /&gt;
first install TISEAN, like you&#039;ve done already.  Make sure R is up to date (v 2.15).  &lt;br /&gt;
you can try to install RTisean from CRAN&lt;br /&gt;
 install.packages(&amp;quot;RTisean&amp;quot;); library(RTisean); henon()&lt;br /&gt;
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-&lt;br /&gt;
Solution:&lt;br /&gt;
 remove.packages(&amp;quot;RTisean&amp;quot;)&lt;br /&gt;
restart R&lt;br /&gt;
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n&lt;br /&gt;
install it,  it changes line 74 of nativeTISEAN.R which has some problems with file handling&lt;br /&gt;
If you are golden, then:&lt;br /&gt;
 &amp;gt; henon()&lt;br /&gt;
             V1        V2&lt;br /&gt;
 [1,] -0.1232481 -1.030383&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
==A conceptual shell==&lt;br /&gt;
&lt;br /&gt;
One thing that I think has been missing from this course is an explicit set of concepts and tools which we can use to relate all of the talks we&#039;ve been listening to.  Last fall, two other graduates students and I taught a survey course on complexity. We put together the following document, which contains one-paragraph summaries of what we felt were the 20 most important concepts that comprised the field of complexity. These were the &amp;quot;glue&amp;quot; that we used to relate all of our lectures and workshops. Most of these will probably be familiar to you, but I think they serve as a nice, concise reference and may be helpful in tying all of this information overload together. One caveat: These are works in progress and are in alphabetical rather than any logical conceptual order.  &lt;br /&gt;
&lt;br /&gt;
[[Media:Topics_in_Complexity_Foundational_Definitions.pdf]]&lt;br /&gt;
&lt;br /&gt;
Cheers,&lt;br /&gt;
Mark Longo&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Experiment_sign-up&amp;diff=46572</id>
		<title>Experiment sign-up</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Experiment_sign-up&amp;diff=46572"/>
		<updated>2012-06-19T01:32:44Z</updated>

		<summary type="html">&lt;p&gt;WeberG: /* Tuesday June 19 */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Hi! Please sign up for one slot below. The experiment will be held in the SENIOR Common Room (again) next to the great hall (YES, JP&#039;s office). Please arrive on time! Ta.&lt;br /&gt;
&lt;br /&gt;
- Katrien, Vanessa, Sandro, Cameron &amp;amp; Jasmeen&lt;br /&gt;
&lt;br /&gt;
==Monday June 18==&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Morning Break:&lt;br /&gt;
&lt;br /&gt;
10.20-10.30: Piotr X&lt;br /&gt;
&lt;br /&gt;
10.30-10.40: Laurent X&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Lunch Break:&lt;br /&gt;
&lt;br /&gt;
12.05-12.15: Chloe X&lt;br /&gt;
&lt;br /&gt;
&#039;&#039;&#039;12.15-12.25: Andres ???&#039;&#039;&#039; &lt;br /&gt;
&lt;br /&gt;
12.25-12.35: Xue X&lt;br /&gt;
&lt;br /&gt;
12.35-12.45: Oleksandr X&lt;br /&gt;
&lt;br /&gt;
12.55-1.05: Nick A X&lt;br /&gt;
&lt;br /&gt;
1.05-1.15: Fabio X&lt;br /&gt;
&lt;br /&gt;
1.15-1.25: Priya X&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Afternoon:&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
5.00-5.10: Matteo X&lt;br /&gt;
&lt;br /&gt;
5.10-5.20: Abby X&lt;br /&gt;
&lt;br /&gt;
5.20-5.30: Elena X&lt;br /&gt;
&lt;br /&gt;
5.30-5.40: Riccardo X&lt;br /&gt;
&lt;br /&gt;
5.40-5.50: [[JP]]! X&lt;br /&gt;
&lt;br /&gt;
6.00-6.10: [[Xin]] X&lt;br /&gt;
&lt;br /&gt;
6.10-6.20: Ian X&lt;br /&gt;
&lt;br /&gt;
6.20-6.30: Keegan&lt;br /&gt;
&lt;br /&gt;
6.30-6.40: Aleksandra&lt;br /&gt;
&lt;br /&gt;
6.40-6.50: Tom X&lt;br /&gt;
&lt;br /&gt;
6.50-7.00:Christa X&lt;br /&gt;
&lt;br /&gt;
==Tuesday June 19==&lt;br /&gt;
&lt;br /&gt;
Morning Break:&lt;br /&gt;
&lt;br /&gt;
10.20-10.30: Vikram&lt;br /&gt;
&lt;br /&gt;
10.30-10.40: Oscar&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Lunch Break:&lt;br /&gt;
&lt;br /&gt;
12.30-12.40: Gareth&lt;br /&gt;
&lt;br /&gt;
12.40-12.50: Sanith&lt;br /&gt;
&lt;br /&gt;
12.50-1.00: Nona&lt;br /&gt;
&lt;br /&gt;
1.00-1.10: Ben&lt;br /&gt;
&lt;br /&gt;
1.10-1.20: Sepehr&lt;br /&gt;
&lt;br /&gt;
1.20-1.30: David P&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Afternoon:&lt;br /&gt;
&lt;br /&gt;
4.30-4.40: dan&lt;br /&gt;
&lt;br /&gt;
4.40-4.50: Georg W.&lt;br /&gt;
&lt;br /&gt;
4.50-5.00:&lt;br /&gt;
&lt;br /&gt;
5.00-5.10:&lt;br /&gt;
&lt;br /&gt;
5.10-5.20:&lt;br /&gt;
&lt;br /&gt;
5.20-5.30:&lt;br /&gt;
&lt;br /&gt;
5.30-5.40:&lt;br /&gt;
&lt;br /&gt;
5.40-5.50:&lt;br /&gt;
&lt;br /&gt;
5.50-6.00:&lt;br /&gt;
&lt;br /&gt;
6.00-6.10:&lt;br /&gt;
&lt;br /&gt;
6.10-6.20:&lt;br /&gt;
&lt;br /&gt;
6.20-6.30:&lt;br /&gt;
&lt;br /&gt;
6.30-6.40:&lt;br /&gt;
&lt;br /&gt;
6.40-6.50:&lt;br /&gt;
&lt;br /&gt;
6.50-7.00:&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Tutorials&amp;diff=46443</id>
		<title>Complex Systems Summer School 2012-Tutorials</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Tutorials&amp;diff=46443"/>
		<updated>2012-06-16T14:38:48Z</updated>

		<summary type="html">&lt;p&gt;WeberG: /* Markov Chain Monte Carlo */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials. &lt;br /&gt;
&lt;br /&gt;
Also, please post requests for tutorials here.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
==Intro to Philosophy of Science==&lt;br /&gt;
&lt;br /&gt;
Hi All, I&#039;ve heard some interest in having a more structured/rigorous intro to ideas in the philosophy of science. I&#039;d be happy to briefly explain some of the classic theories as well as some more recent views due to, e.g. Bas Van Fraassen, James Ladyman, Nancy Cartwright, and we could have a small (moderated!) group discussion. Sign up if interested...   -Jasmeen&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
==Markov Chain Monte Carlo==&lt;br /&gt;
If anyone is interested in talking more about Bayesian methods and MCMC implementation, I&#039;d be happy to put something together. - Keegan&lt;br /&gt;
&lt;br /&gt;
-Hide is interested in this!&lt;br /&gt;
&lt;br /&gt;
-Abby&lt;br /&gt;
&lt;br /&gt;
-Joanne&lt;br /&gt;
&lt;br /&gt;
-Oscar&lt;br /&gt;
&lt;br /&gt;
-Vanessa&lt;br /&gt;
&lt;br /&gt;
-Jasmeen&lt;br /&gt;
&lt;br /&gt;
-Georg&lt;br /&gt;
&lt;br /&gt;
==Python, Computational Mechanics, and Information Theory==&lt;br /&gt;
&lt;br /&gt;
There has been interest in more discussion on a number of topics, and so i&#039;m offering to have evening discussions on them. please sign up below so that i can get a feel for the number of people who would be attending. also, please put a preference for what day it should be.&lt;br /&gt;
&lt;br /&gt;
===Python===&lt;br /&gt;
Sign up below if you&#039;d like an introduction to basic python programming. Python is a general purpose, very flexible and useful programming language. It is used pretty extensively in scientific computing.&lt;br /&gt;
&lt;br /&gt;
dan wu: wu12345@gmail.com Let me know when we&#039;re meeting&lt;br /&gt;
&lt;br /&gt;
- Benji: bzusman@gmail.com &amp;lt;/p&amp;gt;&lt;br /&gt;
&lt;br /&gt;
-Keegan keegan.hines@gmail.com&lt;br /&gt;
&lt;br /&gt;
-Christa (maybe- I&#039;m competent at the very basics, but could still use some help)&lt;br /&gt;
&lt;br /&gt;
- Riccardo: fusaroli@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Oleksandr: krystoferivanov@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Nona: nona.karalashvili@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Xiaoli: xiaolidong2008@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Abby: Abbyhorn@Mit.edu&lt;br /&gt;
&lt;br /&gt;
- Marco: maduenase@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Nick: goudemand at pim dot uzh dot ch&lt;br /&gt;
&lt;br /&gt;
- Fabio: fabio.cresto-aleina@zmaw.de&lt;br /&gt;
&lt;br /&gt;
- Joanne: joannerodrigues@berkeley.edu&lt;br /&gt;
&lt;br /&gt;
- Hide: hi55 at cornell dot edu&lt;br /&gt;
&lt;br /&gt;
- Priya: iitm.priya@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Miguel: miguel.lurgi@icm.csic.es&lt;br /&gt;
&lt;br /&gt;
- Oscar: opatters@asu.edu&lt;br /&gt;
&lt;br /&gt;
- Vanessa: vanferdi at gmail dot com&lt;br /&gt;
&lt;br /&gt;
===Information Theory===&lt;br /&gt;
Interested in turning your data into bits, or seeing how the bits over there are related to the bits over here? If so, sign up below. &amp;lt;br&amp;gt; &lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
- Benji: bzusman@gmail.com&lt;br /&gt;
&lt;br /&gt;
-Keegan keegan.hines@gmail.com&lt;br /&gt;
&lt;br /&gt;
-Riccardo&lt;br /&gt;
&lt;br /&gt;
-Christa&lt;br /&gt;
&lt;br /&gt;
- Katrien&lt;br /&gt;
&lt;br /&gt;
- Xiaoli&lt;br /&gt;
&lt;br /&gt;
- Abby&lt;br /&gt;
 &lt;br /&gt;
- Jasmeen&lt;br /&gt;
&lt;br /&gt;
- Hide&lt;br /&gt;
&lt;br /&gt;
- Sanith&lt;br /&gt;
&lt;br /&gt;
- Priya&lt;br /&gt;
&lt;br /&gt;
- Georg W.&lt;br /&gt;
&lt;br /&gt;
- Piotr&lt;br /&gt;
&lt;br /&gt;
- Miguel&lt;br /&gt;
&lt;br /&gt;
- Oscar&lt;br /&gt;
&lt;br /&gt;
- Vanessa&lt;br /&gt;
&lt;br /&gt;
===Computational Mechanics===&lt;br /&gt;
If you&#039;d like to know more about epsilon machines, measures of complexity, how to go from a map to a machine, i&#039;m happy to discuss it all. &amp;lt;br&amp;gt; &lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
Yes please! --Chloe&lt;br /&gt;
&lt;br /&gt;
-Keegan keegan.hines@gmail.com&lt;br /&gt;
&lt;br /&gt;
-Christa&lt;br /&gt;
&lt;br /&gt;
-Xiaoli&lt;br /&gt;
&lt;br /&gt;
-Jasmeen&lt;br /&gt;
&lt;br /&gt;
-Hide&lt;br /&gt;
&lt;br /&gt;
-Sanith&lt;br /&gt;
&lt;br /&gt;
- Priya&lt;br /&gt;
&lt;br /&gt;
- Georg W.&lt;br /&gt;
&lt;br /&gt;
-Piotr&lt;br /&gt;
&lt;br /&gt;
-Ian&lt;br /&gt;
&lt;br /&gt;
- Miguel&lt;br /&gt;
&lt;br /&gt;
- Oscar&lt;br /&gt;
&lt;br /&gt;
- Abby&lt;br /&gt;
&lt;br /&gt;
==Order Book Dynamics: Learn how to trade in 15min==&lt;br /&gt;
&lt;br /&gt;
--I&#039;m happy to repeat this -just get in touch with me.--&lt;br /&gt;
&lt;br /&gt;
If you are curious about how stocks trade and want to try your luck, I&#039;ll&lt;br /&gt;
be going over some of the basics with a hands-on example.&lt;br /&gt;
&lt;br /&gt;
Meet at 7.30pm in main lecture hall Thursday June 7th. Please make sure&lt;br /&gt;
to bring your laptop.&lt;br /&gt;
&lt;br /&gt;
Sanith&lt;br /&gt;
&lt;br /&gt;
==Update==&lt;br /&gt;
&lt;br /&gt;
Hi guys&lt;br /&gt;
&lt;br /&gt;
I guess the mail lecture hall is free at 6.30 pm and so we can meet there. I have a small talk through the idea and then maybe we can try out getting bifurcation plots for one or two systems. I use software written in MATLAB for the demo but the idea can be implemented in any software. &lt;br /&gt;
&lt;br /&gt;
Here&#039;s a link to the [[software for numerical continuation|http://twr.cs.kuleuven.be//research/software/delay/notice.shtml]]. This software can handle systems with time delays and can be used to obtain the bifurcation behaviour. &lt;br /&gt;
&lt;br /&gt;
(1)	Please download the software DDE-BIFTOOL and unzip. &lt;br /&gt;
&lt;br /&gt;
(2)	Within the folder, you will find another zipped folder in small case ‘ddebiftool’. Please unzip this into a folder with the same name&lt;br /&gt;
&lt;br /&gt;
(3)	Add the location of the folder to the path of MATLAB. &lt;br /&gt;
I have also sent out a mail with a zipped folder containing files to get a bifurcation plot for a Rijke tube system. &lt;br /&gt;
Do let me know if anyone did not get this. &lt;br /&gt;
See you there!&lt;br /&gt;
&lt;br /&gt;
Priya&lt;br /&gt;
&lt;br /&gt;
==An easier way to get a bifurcation plot==&lt;br /&gt;
&lt;br /&gt;
Hey guys&lt;br /&gt;
I have been working in the past in obtaining bifurcation plots for different physical systems. There&#039;s a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called &#039;&#039;numerical continuation&#039;&#039; and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at &#039;&#039;&#039;iitm.priya@gmail.com&#039;&#039;&#039; or sign up below. &lt;br /&gt;
[[User:Priya|Priya]]&lt;br /&gt;
&lt;br /&gt;
- [[Ryan James|Ryan]] is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Riccardo is interested in this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Vikram is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Matteo is interested in this.&amp;lt;br&amp;gt; &lt;br /&gt;
- Hide is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Katrien wants to hear more about this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Cameron is interested in this and would like to see [http://itunes.apple.com/us/app/xpp/id433859546?mt=8 this] in action if anyone has an iPad. &amp;lt;br&amp;gt;&lt;br /&gt;
- Oscar is interested in this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Charlie is interested in this. (I&#039;ve done this once for a paper.) &amp;lt;br&amp;gt;&lt;br /&gt;
- Georg W. is interested in this &amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Using Tisean on R on OS X==&lt;br /&gt;
first install TISEAN, like you&#039;ve done already.  Make sure R is up to date (v 2.15).  &lt;br /&gt;
you can try to install RTisean from CRAN&lt;br /&gt;
 install.packages(&amp;quot;RTisean&amp;quot;); library(RTisean); henon()&lt;br /&gt;
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-&lt;br /&gt;
Solution:&lt;br /&gt;
 remove.packages(&amp;quot;RTisean&amp;quot;)&lt;br /&gt;
restart R&lt;br /&gt;
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n&lt;br /&gt;
install it,  it changes line 74 of nativeTISEAN.R which has some problems with file handling&lt;br /&gt;
If you are golden, then:&lt;br /&gt;
 &amp;gt; henon()&lt;br /&gt;
             V1        V2&lt;br /&gt;
 [1,] -0.1232481 -1.030383&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Tutorials&amp;diff=46331</id>
		<title>Complex Systems Summer School 2012-Tutorials</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Tutorials&amp;diff=46331"/>
		<updated>2012-06-14T04:41:11Z</updated>

		<summary type="html">&lt;p&gt;WeberG: /* Computational Mechanics */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials. &lt;br /&gt;
&lt;br /&gt;
Also, please post requests for tutorials here.&lt;br /&gt;
&lt;br /&gt;
==Python, Computational Mechanics, and Information Theory==&lt;br /&gt;
&lt;br /&gt;
There has been interest in more discussion on a number of topics, and so i&#039;m offering to have evening discussions on them. please sign up below so that i can get a feel for the number of people who would be attending. also, please put a preference for what day it should be.&lt;br /&gt;
&lt;br /&gt;
===Python===&lt;br /&gt;
Sign up below if you&#039;d like an introduction to basic python programming. Python is a general purpose, very flexible and useful programming language. It is used pretty extensively in scientific computing.&lt;br /&gt;
&lt;br /&gt;
dan wu: wu12345@gmail.com Let me know when we&#039;re meeting&lt;br /&gt;
&lt;br /&gt;
- Benji: bzusman@gmail.com &amp;lt;/p&amp;gt;&lt;br /&gt;
&lt;br /&gt;
-Keegan&lt;br /&gt;
&lt;br /&gt;
-Christa (maybe- I&#039;m competent at the very basics, but could still use some help)&lt;br /&gt;
&lt;br /&gt;
-Riccardo&lt;br /&gt;
&lt;br /&gt;
- Oleksandr: krystoferivanov@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Nona: nona.karalashvili@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Xiaoli: xiaolidong2008@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Abby: Abbyhorn@Mit.edu&lt;br /&gt;
&lt;br /&gt;
- Marco: maduenase@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Nick: goudemand at pim dot uzh dot ch&lt;br /&gt;
&lt;br /&gt;
- Hide: hi55 at cornell dot edu&lt;br /&gt;
&lt;br /&gt;
- Priya: iitm.priya@gmail.com&lt;br /&gt;
&lt;br /&gt;
===Information Theory===&lt;br /&gt;
Interested in turning your data into bits, or seeing how the bits over there are related to the bits over here? If so, sign up below. &amp;lt;br&amp;gt; &lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
- Benji: bzusman@gmail.com&lt;br /&gt;
&lt;br /&gt;
-Keegan&lt;br /&gt;
&lt;br /&gt;
-Riccardo&lt;br /&gt;
&lt;br /&gt;
-Christa&lt;br /&gt;
&lt;br /&gt;
- Katrien&lt;br /&gt;
&lt;br /&gt;
- Xiaoli&lt;br /&gt;
&lt;br /&gt;
- Abby&lt;br /&gt;
 &lt;br /&gt;
- Jasmeen&lt;br /&gt;
&lt;br /&gt;
- Hide&lt;br /&gt;
&lt;br /&gt;
- Sanith&lt;br /&gt;
&lt;br /&gt;
- Priya&lt;br /&gt;
&lt;br /&gt;
- Georg W.&lt;br /&gt;
&lt;br /&gt;
===Computational Mechanics===&lt;br /&gt;
If you&#039;d like to know more about epsilon machines, measures of complexity, how to go from a map to a machine, i&#039;m happy to discuss it all. &amp;lt;br&amp;gt; &lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
Yes please! --Chloe&lt;br /&gt;
&lt;br /&gt;
-Keegan&lt;br /&gt;
&lt;br /&gt;
-Christa&lt;br /&gt;
&lt;br /&gt;
-Xiaoli&lt;br /&gt;
&lt;br /&gt;
-Jasmeen&lt;br /&gt;
&lt;br /&gt;
-Hide&lt;br /&gt;
&lt;br /&gt;
-Sanith&lt;br /&gt;
&lt;br /&gt;
- Priya&lt;br /&gt;
&lt;br /&gt;
- Georg W.&lt;br /&gt;
&lt;br /&gt;
==Order Book Dynamics: Learn how to trade in 15min==&lt;br /&gt;
&lt;br /&gt;
--I&#039;m happy to repeat this -just get in touch with me.--&lt;br /&gt;
&lt;br /&gt;
If you are curious about how stocks trade and want to try your luck, I&#039;ll&lt;br /&gt;
be going over some of the basics with a hands-on example.&lt;br /&gt;
&lt;br /&gt;
Meet at 7.30pm in main lecture hall Thursday June 7th. Please make sure&lt;br /&gt;
to bring your laptop.&lt;br /&gt;
&lt;br /&gt;
Sanith&lt;br /&gt;
&lt;br /&gt;
==An easier way to get a bifurcation plot==&lt;br /&gt;
&lt;br /&gt;
Hey guys&lt;br /&gt;
I have been working in the past in obtaining bifurcation plots for different physical systems. There&#039;s a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called &#039;&#039;numerical continuation&#039;&#039; and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at &#039;&#039;&#039;iitm.priya@gmail.com&#039;&#039;&#039; or sign up below. &lt;br /&gt;
[[User:Priya|Priya]]&lt;br /&gt;
&lt;br /&gt;
- [[Ryan James|Ryan]] is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Riccardo is interested in this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Vikram is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Matteo is interested in this.&amp;lt;br&amp;gt; &lt;br /&gt;
- Hide is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Katrien wants to hear more about this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Cameron is interested in this and would like to see [http://itunes.apple.com/us/app/xpp/id433859546?mt=8 this] in action if anyone has an iPad. &amp;lt;br&amp;gt;&lt;br /&gt;
- Oscar is interested in this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Charlie is interested in this. (I&#039;ve done this once for a paper.) &amp;lt;br&amp;gt;&lt;br /&gt;
- Georg W. is interested in this &amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Using Tisean on R on OS X==&lt;br /&gt;
first install TISEAN, like you&#039;ve done already.  Make sure R is up to date (v 2.15).  &lt;br /&gt;
you can try to install RTisean from CRAN&lt;br /&gt;
 install.packages(&amp;quot;RTisean&amp;quot;); library(RTisean); henon()&lt;br /&gt;
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-&lt;br /&gt;
Solution:&lt;br /&gt;
 remove.packages(&amp;quot;RTisean&amp;quot;)&lt;br /&gt;
restart R&lt;br /&gt;
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n&lt;br /&gt;
install it,  it changes line 74 of nativeTISEAN.R which has some problems with file handling&lt;br /&gt;
If you are golden, then:&lt;br /&gt;
 &amp;gt; henon()&lt;br /&gt;
             V1        V2&lt;br /&gt;
 [1,] -0.1232481 -1.030383&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Tutorials&amp;diff=46330</id>
		<title>Complex Systems Summer School 2012-Tutorials</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Tutorials&amp;diff=46330"/>
		<updated>2012-06-14T04:40:39Z</updated>

		<summary type="html">&lt;p&gt;WeberG: /* Information Theory */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials. &lt;br /&gt;
&lt;br /&gt;
Also, please post requests for tutorials here.&lt;br /&gt;
&lt;br /&gt;
==Python, Computational Mechanics, and Information Theory==&lt;br /&gt;
&lt;br /&gt;
There has been interest in more discussion on a number of topics, and so i&#039;m offering to have evening discussions on them. please sign up below so that i can get a feel for the number of people who would be attending. also, please put a preference for what day it should be.&lt;br /&gt;
&lt;br /&gt;
===Python===&lt;br /&gt;
Sign up below if you&#039;d like an introduction to basic python programming. Python is a general purpose, very flexible and useful programming language. It is used pretty extensively in scientific computing.&lt;br /&gt;
&lt;br /&gt;
dan wu: wu12345@gmail.com Let me know when we&#039;re meeting&lt;br /&gt;
&lt;br /&gt;
- Benji: bzusman@gmail.com &amp;lt;/p&amp;gt;&lt;br /&gt;
&lt;br /&gt;
-Keegan&lt;br /&gt;
&lt;br /&gt;
-Christa (maybe- I&#039;m competent at the very basics, but could still use some help)&lt;br /&gt;
&lt;br /&gt;
-Riccardo&lt;br /&gt;
&lt;br /&gt;
- Oleksandr: krystoferivanov@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Nona: nona.karalashvili@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Xiaoli: xiaolidong2008@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Abby: Abbyhorn@Mit.edu&lt;br /&gt;
&lt;br /&gt;
- Marco: maduenase@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Nick: goudemand at pim dot uzh dot ch&lt;br /&gt;
&lt;br /&gt;
- Hide: hi55 at cornell dot edu&lt;br /&gt;
&lt;br /&gt;
- Priya: iitm.priya@gmail.com&lt;br /&gt;
&lt;br /&gt;
===Information Theory===&lt;br /&gt;
Interested in turning your data into bits, or seeing how the bits over there are related to the bits over here? If so, sign up below. &amp;lt;br&amp;gt; &lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
- Benji: bzusman@gmail.com&lt;br /&gt;
&lt;br /&gt;
-Keegan&lt;br /&gt;
&lt;br /&gt;
-Riccardo&lt;br /&gt;
&lt;br /&gt;
-Christa&lt;br /&gt;
&lt;br /&gt;
- Katrien&lt;br /&gt;
&lt;br /&gt;
- Xiaoli&lt;br /&gt;
&lt;br /&gt;
- Abby&lt;br /&gt;
 &lt;br /&gt;
- Jasmeen&lt;br /&gt;
&lt;br /&gt;
- Hide&lt;br /&gt;
&lt;br /&gt;
- Sanith&lt;br /&gt;
&lt;br /&gt;
- Priya&lt;br /&gt;
&lt;br /&gt;
- Georg W.&lt;br /&gt;
&lt;br /&gt;
===Computational Mechanics===&lt;br /&gt;
If you&#039;d like to know more about epsilon machines, measures of complexity, how to go from a map to a machine, i&#039;m happy to discuss it all. &amp;lt;br&amp;gt; &lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
Yes please! --Chloe&lt;br /&gt;
&lt;br /&gt;
-Keegan&lt;br /&gt;
&lt;br /&gt;
-Christa&lt;br /&gt;
&lt;br /&gt;
-Xiaoli&lt;br /&gt;
&lt;br /&gt;
-Jasmeen&lt;br /&gt;
&lt;br /&gt;
-Hide&lt;br /&gt;
&lt;br /&gt;
-Sanith&lt;br /&gt;
&lt;br /&gt;
- Priya&lt;br /&gt;
&lt;br /&gt;
==Order Book Dynamics: Learn how to trade in 15min==&lt;br /&gt;
&lt;br /&gt;
--I&#039;m happy to repeat this -just get in touch with me.--&lt;br /&gt;
&lt;br /&gt;
If you are curious about how stocks trade and want to try your luck, I&#039;ll&lt;br /&gt;
be going over some of the basics with a hands-on example.&lt;br /&gt;
&lt;br /&gt;
Meet at 7.30pm in main lecture hall Thursday June 7th. Please make sure&lt;br /&gt;
to bring your laptop.&lt;br /&gt;
&lt;br /&gt;
Sanith&lt;br /&gt;
&lt;br /&gt;
==An easier way to get a bifurcation plot==&lt;br /&gt;
&lt;br /&gt;
Hey guys&lt;br /&gt;
I have been working in the past in obtaining bifurcation plots for different physical systems. There&#039;s a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called &#039;&#039;numerical continuation&#039;&#039; and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at &#039;&#039;&#039;iitm.priya@gmail.com&#039;&#039;&#039; or sign up below. &lt;br /&gt;
[[User:Priya|Priya]]&lt;br /&gt;
&lt;br /&gt;
- [[Ryan James|Ryan]] is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Riccardo is interested in this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Vikram is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Matteo is interested in this.&amp;lt;br&amp;gt; &lt;br /&gt;
- Hide is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Katrien wants to hear more about this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Cameron is interested in this and would like to see [http://itunes.apple.com/us/app/xpp/id433859546?mt=8 this] in action if anyone has an iPad. &amp;lt;br&amp;gt;&lt;br /&gt;
- Oscar is interested in this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Charlie is interested in this. (I&#039;ve done this once for a paper.) &amp;lt;br&amp;gt;&lt;br /&gt;
- Georg W. is interested in this &amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Using Tisean on R on OS X==&lt;br /&gt;
first install TISEAN, like you&#039;ve done already.  Make sure R is up to date (v 2.15).  &lt;br /&gt;
you can try to install RTisean from CRAN&lt;br /&gt;
 install.packages(&amp;quot;RTisean&amp;quot;); library(RTisean); henon()&lt;br /&gt;
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-&lt;br /&gt;
Solution:&lt;br /&gt;
 remove.packages(&amp;quot;RTisean&amp;quot;)&lt;br /&gt;
restart R&lt;br /&gt;
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n&lt;br /&gt;
install it,  it changes line 74 of nativeTISEAN.R which has some problems with file handling&lt;br /&gt;
If you are golden, then:&lt;br /&gt;
 &amp;gt; henon()&lt;br /&gt;
             V1        V2&lt;br /&gt;
 [1,] -0.1232481 -1.030383&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Tutorials&amp;diff=46329</id>
		<title>Complex Systems Summer School 2012-Tutorials</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Tutorials&amp;diff=46329"/>
		<updated>2012-06-14T04:38:30Z</updated>

		<summary type="html">&lt;p&gt;WeberG: /* An easier way to get a bifurcation plot */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials. &lt;br /&gt;
&lt;br /&gt;
Also, please post requests for tutorials here.&lt;br /&gt;
&lt;br /&gt;
==Python, Computational Mechanics, and Information Theory==&lt;br /&gt;
&lt;br /&gt;
There has been interest in more discussion on a number of topics, and so i&#039;m offering to have evening discussions on them. please sign up below so that i can get a feel for the number of people who would be attending. also, please put a preference for what day it should be.&lt;br /&gt;
&lt;br /&gt;
===Python===&lt;br /&gt;
Sign up below if you&#039;d like an introduction to basic python programming. Python is a general purpose, very flexible and useful programming language. It is used pretty extensively in scientific computing.&lt;br /&gt;
&lt;br /&gt;
dan wu: wu12345@gmail.com Let me know when we&#039;re meeting&lt;br /&gt;
&lt;br /&gt;
- Benji: bzusman@gmail.com &amp;lt;/p&amp;gt;&lt;br /&gt;
&lt;br /&gt;
-Keegan&lt;br /&gt;
&lt;br /&gt;
-Christa (maybe- I&#039;m competent at the very basics, but could still use some help)&lt;br /&gt;
&lt;br /&gt;
-Riccardo&lt;br /&gt;
&lt;br /&gt;
- Oleksandr: krystoferivanov@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Nona: nona.karalashvili@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Xiaoli: xiaolidong2008@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Abby: Abbyhorn@Mit.edu&lt;br /&gt;
&lt;br /&gt;
- Marco: maduenase@gmail.com&lt;br /&gt;
&lt;br /&gt;
- Nick: goudemand at pim dot uzh dot ch&lt;br /&gt;
&lt;br /&gt;
- Hide: hi55 at cornell dot edu&lt;br /&gt;
&lt;br /&gt;
- Priya: iitm.priya@gmail.com&lt;br /&gt;
&lt;br /&gt;
===Information Theory===&lt;br /&gt;
Interested in turning your data into bits, or seeing how the bits over there are related to the bits over here? If so, sign up below. &amp;lt;br&amp;gt; &lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
- Benji: bzusman@gmail.com&lt;br /&gt;
&lt;br /&gt;
-Keegan&lt;br /&gt;
&lt;br /&gt;
-Riccardo&lt;br /&gt;
&lt;br /&gt;
-Christa&lt;br /&gt;
&lt;br /&gt;
- Katrien&lt;br /&gt;
&lt;br /&gt;
- Xiaoli&lt;br /&gt;
&lt;br /&gt;
- Abby&lt;br /&gt;
 &lt;br /&gt;
- Jasmeen&lt;br /&gt;
&lt;br /&gt;
- Hide&lt;br /&gt;
&lt;br /&gt;
- Sanith&lt;br /&gt;
&lt;br /&gt;
- Priya&lt;br /&gt;
&lt;br /&gt;
===Computational Mechanics===&lt;br /&gt;
If you&#039;d like to know more about epsilon machines, measures of complexity, how to go from a map to a machine, i&#039;m happy to discuss it all. &amp;lt;br&amp;gt; &lt;br /&gt;
- Matteo&lt;br /&gt;
&lt;br /&gt;
Yes please! --Chloe&lt;br /&gt;
&lt;br /&gt;
-Keegan&lt;br /&gt;
&lt;br /&gt;
-Christa&lt;br /&gt;
&lt;br /&gt;
-Xiaoli&lt;br /&gt;
&lt;br /&gt;
-Jasmeen&lt;br /&gt;
&lt;br /&gt;
-Hide&lt;br /&gt;
&lt;br /&gt;
-Sanith&lt;br /&gt;
&lt;br /&gt;
- Priya&lt;br /&gt;
&lt;br /&gt;
==Order Book Dynamics: Learn how to trade in 15min==&lt;br /&gt;
&lt;br /&gt;
--I&#039;m happy to repeat this -just get in touch with me.--&lt;br /&gt;
&lt;br /&gt;
If you are curious about how stocks trade and want to try your luck, I&#039;ll&lt;br /&gt;
be going over some of the basics with a hands-on example.&lt;br /&gt;
&lt;br /&gt;
Meet at 7.30pm in main lecture hall Thursday June 7th. Please make sure&lt;br /&gt;
to bring your laptop.&lt;br /&gt;
&lt;br /&gt;
Sanith&lt;br /&gt;
&lt;br /&gt;
==An easier way to get a bifurcation plot==&lt;br /&gt;
&lt;br /&gt;
Hey guys&lt;br /&gt;
I have been working in the past in obtaining bifurcation plots for different physical systems. There&#039;s a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called &#039;&#039;numerical continuation&#039;&#039; and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at &#039;&#039;&#039;iitm.priya@gmail.com&#039;&#039;&#039; or sign up below. &lt;br /&gt;
[[User:Priya|Priya]]&lt;br /&gt;
&lt;br /&gt;
- [[Ryan James|Ryan]] is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Riccardo is interested in this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Vikram is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Matteo is interested in this.&amp;lt;br&amp;gt; &lt;br /&gt;
- Hide is interested in this.&amp;lt;br&amp;gt;&lt;br /&gt;
- Katrien wants to hear more about this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Cameron is interested in this and would like to see [http://itunes.apple.com/us/app/xpp/id433859546?mt=8 this] in action if anyone has an iPad. &amp;lt;br&amp;gt;&lt;br /&gt;
- Oscar is interested in this. &amp;lt;br&amp;gt;&lt;br /&gt;
- Charlie is interested in this. (I&#039;ve done this once for a paper.) &amp;lt;br&amp;gt;&lt;br /&gt;
- Georg W. is interested in this &amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Using Tisean on R on OS X==&lt;br /&gt;
first install TISEAN, like you&#039;ve done already.  Make sure R is up to date (v 2.15).  &lt;br /&gt;
you can try to install RTisean from CRAN&lt;br /&gt;
 install.packages(&amp;quot;RTisean&amp;quot;); library(RTisean); henon()&lt;br /&gt;
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-&lt;br /&gt;
Solution:&lt;br /&gt;
 remove.packages(&amp;quot;RTisean&amp;quot;)&lt;br /&gt;
restart R&lt;br /&gt;
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n&lt;br /&gt;
install it,  it changes line 74 of nativeTISEAN.R which has some problems with file handling&lt;br /&gt;
If you are golden, then:&lt;br /&gt;
 &amp;gt; henon()&lt;br /&gt;
             V1        V2&lt;br /&gt;
 [1,] -0.1232481 -1.030383&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-TShirts&amp;diff=46074</id>
		<title>Complex Systems Summer School 2012-TShirts</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-TShirts&amp;diff=46074"/>
		<updated>2012-06-10T14:06:21Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
Every year we have a T-shirt design contest, where CSSS Students create designs (relevant to the summer school) and during the end of the second week we vote on the one we will print and distribute to the cohort. Please post your T-shirt design below. The design will be printed on a single colored T-shirt (keep in mind which color T-shirt you would like to print on while planning your design). The print that will go on the T-shirt is limited to a two color back and a one color front. &lt;br /&gt;
&lt;br /&gt;
Have fun and be creative!&lt;br /&gt;
&lt;br /&gt;
==2012 CSSS T-Shirt Design Submissions==&lt;br /&gt;
[[File:Urania.jpg]]&lt;br /&gt;
&lt;br /&gt;
Urania blowing seeds of complexity&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
This is a draft I prepared a late evening some time before the CSSS. I didn&#039;t know at that time that the dorms have muse names and that I&#039;ll end up in the Urania...&lt;br /&gt;
&lt;br /&gt;
Urania was the muse of Astronomy and also the Muse of Mathematics. she was often depicted holding a globe in her hands. In this case the cubist face and hands of Urania are borrowed from Picasso and she holds a SFI globe/dandelion flower head, on which she blows in order to disperse the seeds of complexity.&lt;br /&gt;
&lt;br /&gt;
In my view this would need some serious polishing and volunteers to do so are welcome! Feedbacks also!&lt;br /&gt;
&lt;br /&gt;
Cheers, Nick Goudemand&lt;br /&gt;
&lt;br /&gt;
------------------------------------------------------------------------------------------------------&lt;br /&gt;
&lt;br /&gt;
[[File:SFI transit small.jpg]]&lt;br /&gt;
&lt;br /&gt;
SFI transit: the next generation of innovation is coming!&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
One more design. &lt;br /&gt;
&lt;br /&gt;
Cheers, Nick G&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[File:T shirt.jpg]]&lt;br /&gt;
&lt;br /&gt;
Crystals are a prime manifestation of complexity. The design (front and back) represents crystals grown in cell culture dishes as seen under the microscope. The picture on the right has been mapped on a canvas with polar coordinates to show more symmetrical structure and avoid having a beginning and an end. (One from Georg Weber)&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-TShirts&amp;diff=46060</id>
		<title>Complex Systems Summer School 2012-TShirts</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-TShirts&amp;diff=46060"/>
		<updated>2012-06-10T02:31:19Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
Every year we have a T-shirt design contest, where CSSS Students create designs (relevant to the summer school) and during the end of the second week we vote on the one we will print and distribute to the cohort. Please post your T-shirt design below. The design will be printed on a single colored T-shirt (keep in mind which color T-shirt you would like to print on while planning your design). The print that will go on the T-shirt is limited to a two color back and a one color front. &lt;br /&gt;
&lt;br /&gt;
Have fun and be creative!&lt;br /&gt;
&lt;br /&gt;
==2012 CSSS T-Shirt Design Submissions==&lt;br /&gt;
[[File:Urania.jpg]]&lt;br /&gt;
&lt;br /&gt;
Urania blowing seeds of complexity&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
This is a draft I prepared a late evening some time before the CSSS. I didn&#039;t know at that time that the dorms have muse names and that I&#039;ll end up in the Urania...&lt;br /&gt;
&lt;br /&gt;
Urania was the muse of Astronomy and also the Muse of Mathematics. she was often depicted holding a globe in her hands. In this case the cubist face and hands of Urania are borrowed from Picasso and she holds a SFI globe/dandelion flower head, on which she blows in order to disperse the seeds of complexity.&lt;br /&gt;
&lt;br /&gt;
In my view this would need some serious polishing and volunteers to do so are welcome! Feedbacks also!&lt;br /&gt;
&lt;br /&gt;
Cheers, Nick Goudemand&lt;br /&gt;
&lt;br /&gt;
------------------------------------------------------------------------------------------------------&lt;br /&gt;
&lt;br /&gt;
[[File:SFI transit small.jpg]]&lt;br /&gt;
&lt;br /&gt;
SFI transit: the next generation of innovation is coming!&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
One more design. &lt;br /&gt;
&lt;br /&gt;
Cheers, Nick G&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[File:T shirt.jpg]]&lt;br /&gt;
&lt;br /&gt;
Crystals are a prime manifestation of complexity. The design (front and back) represents crystals grown in cell culture dishes as seen under the microscope. The picture on the right has been mapped on a polar canvas to show more symmetrical structure and avoid having a beginning and an end. (One from Georg Weber)&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-TShirts&amp;diff=46059</id>
		<title>Complex Systems Summer School 2012-TShirts</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-TShirts&amp;diff=46059"/>
		<updated>2012-06-10T02:28:48Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
Every year we have a T-shirt design contest, where CSSS Students create designs (relevant to the summer school) and during the end of the second week we vote on the one we will print and distribute to the cohort. Please post your T-shirt design below. The design will be printed on a single colored T-shirt (keep in mind which color T-shirt you would like to print on while planning your design). The print that will go on the T-shirt is limited to a two color back and a one color front. &lt;br /&gt;
&lt;br /&gt;
Have fun and be creative!&lt;br /&gt;
&lt;br /&gt;
==2012 CSSS T-Shirt Design Submissions==&lt;br /&gt;
[[File:Urania.jpg]]&lt;br /&gt;
&lt;br /&gt;
Urania blowing seeds of complexity&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
This is a draft I prepared a late evening some time before the CSSS. I didn&#039;t know at that time that the dorms have muse names and that I&#039;ll end up in the Urania...&lt;br /&gt;
&lt;br /&gt;
Urania was the muse of Astronomy and also the Muse of Mathematics. she was often depicted holding a globe in her hands. In this case the cubist face and hands of Urania are borrowed from Picasso and she holds a SFI globe/dandelion flower head, on which she blows in order to disperse the seeds of complexity.&lt;br /&gt;
&lt;br /&gt;
In my view this would need some serious polishing and volunteers to do so are welcome! Feedbacks also!&lt;br /&gt;
&lt;br /&gt;
Cheers, Nick Goudemand&lt;br /&gt;
&lt;br /&gt;
------------------------------------------------------------------------------------------------------&lt;br /&gt;
&lt;br /&gt;
[[File:SFI transit small.jpg]]&lt;br /&gt;
&lt;br /&gt;
SFI transit: the next generation of innovation is coming!&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
One more design. &lt;br /&gt;
&lt;br /&gt;
Cheers, Nick G&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[File:T shirt.jpg]]&lt;br /&gt;
&lt;br /&gt;
Crystals are a prime manifestation of complexity. The design (front and back) represents crystals grown in cell culture dishes as seen under the microscope. The picture on the right has been circularized to show more symmetrical structure and avoid having a beginning and an end. (One from Georg Weber)&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=File:T_shirt.jpg&amp;diff=46034</id>
		<title>File:T shirt.jpg</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=File:T_shirt.jpg&amp;diff=46034"/>
		<updated>2012-06-09T03:13:41Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Bandelier_Trip_2012&amp;diff=45944</id>
		<title>Bandelier Trip 2012</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Bandelier_Trip_2012&amp;diff=45944"/>
		<updated>2012-06-07T01:51:06Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Please sign up here so we know who&#039;s going.&amp;lt;br&amp;gt;&lt;br /&gt;
Also: If you have a car, please let us know. The more cars, the more people.&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
We&#039;ll meet Saturday at 10:00am in the parking circle.&lt;br /&gt;
&lt;br /&gt;
Please remember to bring a hat, sunscreen, water, hiking shoes, and anything else you&#039;ll need for a day out in the field.&lt;br /&gt;
&lt;br /&gt;
==Cars:==&lt;br /&gt;
&lt;br /&gt;
===Tom&#039;s Sedan: 4 seats===&lt;br /&gt;
1. [[Nicholas Allgaier]]&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
2. Vikram Vijayaraghavan &amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
3. Katrien Beuls &amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
4. Riccardo Fusaroli &amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
===John Paul&#039;s Camry: 4 (maybe 5) seats===&lt;br /&gt;
&lt;br /&gt;
1. [[John Paul]]&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
2. [[Matteo Chinazzi]]&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
3. [[Chloe Lewis]]&amp;lt;br&amp;gt; &lt;br /&gt;
&lt;br /&gt;
4. [[Xue Feng]]&amp;lt;br&amp;gt; &lt;br /&gt;
&lt;br /&gt;
5. [[Joanne Rodrigues]]&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
===Juniper&#039;s Car: 4 seats===&lt;br /&gt;
&lt;br /&gt;
1. Jasmeen Kanwal&lt;br /&gt;
&lt;br /&gt;
2. Sarah Tweedt&lt;br /&gt;
&lt;br /&gt;
3. Mark Longo&lt;br /&gt;
&lt;br /&gt;
4. Hide Inamine&lt;br /&gt;
&lt;br /&gt;
===[http://tuvalu.santafe.edu/events/workshops/index.php/Christa_Brelsford Christa]&#039;s Car: 4 (maybe 5) seats===&lt;br /&gt;
&lt;br /&gt;
1. Christa&lt;br /&gt;
&lt;br /&gt;
2. Nicolas Goudemand&lt;br /&gt;
&lt;br /&gt;
3. Marco&lt;br /&gt;
&lt;br /&gt;
4. [http://tuvalu.santafe.edu/events/workshops/index.php/Xin_Lu Xin]&lt;br /&gt;
&lt;br /&gt;
5(middle seat in a 2 door civic). [[Miguel Lurgi]]&lt;br /&gt;
&lt;br /&gt;
===STILL NEEDS A SEAT!===&lt;br /&gt;
1. Priya Subramanian&lt;br /&gt;
&lt;br /&gt;
2. [[Piotr Milanowski | Piotr]] &lt;br /&gt;
&lt;br /&gt;
3. Georg M Goerg&lt;br /&gt;
&lt;br /&gt;
4. Oleksandr Ivanov&lt;br /&gt;
&lt;br /&gt;
5. Ben Althouse&lt;br /&gt;
&lt;br /&gt;
6. Georg Weber&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Projects_%26_Working_Groups&amp;diff=45650</id>
		<title>Complex Systems Summer School 2012-Projects &amp; Working Groups</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Complex_Systems_Summer_School_2012-Projects_%26_Working_Groups&amp;diff=45650"/>
		<updated>2012-06-05T00:41:33Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
* nonequilibrium game theory --- my plan is to adapt some SFI-based models, by people like Crutchfield and Farmer, so that they will quantitatively or qualitatively reproduce features of real human data.  Meet Seth Frey at dinner on Thursday and Friday.&lt;br /&gt;
* Enzyme kinetics – Do enzymes just accelerate equilibrium or play an active role in chemical reactions?&lt;br /&gt;
Enzyme networks (e.g. glycolysis) and catalysts in complex mixtures (e.g. Belusov-Zhabotinski reaction) can profoundly influence the outcome of a chemical reaction system. What about a single enzyme? Biochemistry textbooks uniformly say that an enzyme accelerates a reaction without altering its outcome. Yet, the set of differential equations that generically describes enzyme catalysis has remarkable resemblance to the Roessler equations (a textbook example of a non-linear, complex system). With a fixed substrate input or a steady substrate flow, a single enzyme probably cannot affect the reaction outcome. However, sinusoidal or pulsating substrate input, substrate activation or product inhibition, coupling of two enzymes could turn the reaction pattern non-linear.  For this project, the sets of equations to study are quite well established – they need to be analyzed. In contrast to some of the more ambitious ideas circulated, this task is exhaustively doable in less than four weeks.&lt;br /&gt;
I am Georg Weber. If you are interested in studying this problem, please find me on Tuesday over lunch or dinner (or talk to me at any other unstructured time). &lt;br /&gt;
* next idea here&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Talk:Complex_Systems_Summer_School_2012-Blog&amp;diff=45644</id>
		<title>Talk:Complex Systems Summer School 2012-Blog</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Talk:Complex_Systems_Summer_School_2012-Blog&amp;diff=45644"/>
		<updated>2012-06-04T20:40:21Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;== Workshop 1 ==&lt;br /&gt;
&lt;br /&gt;
N = 3, R = 3.831&lt;br /&gt;
&lt;br /&gt;
N = 7, R = 3.7021277&lt;br /&gt;
&lt;br /&gt;
N = 6, R = 3.635&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Alfred_Hubler%27s_Nonlinear_Dynamics_Lab_2012&amp;diff=45574</id>
		<title>Alfred Hubler&#039;s Nonlinear Dynamics Lab 2012</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Alfred_Hubler%27s_Nonlinear_Dynamics_Lab_2012&amp;diff=45574"/>
		<updated>2012-06-03T19:09:43Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
==Thursday, June 7, 6:00pm==&lt;br /&gt;
&lt;br /&gt;
1. Sarah Tweedt &amp;lt;br&amp;gt;&lt;br /&gt;
2. Georg F. Weber &amp;lt;br&amp;gt;&lt;br /&gt;
3.&amp;lt;br&amp;gt;&lt;br /&gt;
4.&amp;lt;br&amp;gt;&lt;br /&gt;
5.&amp;lt;br&amp;gt;&lt;br /&gt;
6.&amp;lt;br&amp;gt;&lt;br /&gt;
7.&amp;lt;br&amp;gt;&lt;br /&gt;
8.&amp;lt;br&amp;gt;&lt;br /&gt;
9.&amp;lt;br&amp;gt;&lt;br /&gt;
10.&amp;lt;br&amp;gt;&lt;br /&gt;
11.&amp;lt;br&amp;gt;&lt;br /&gt;
12.&amp;lt;br&amp;gt;&lt;br /&gt;
13.&amp;lt;br&amp;gt;&lt;br /&gt;
14.&amp;lt;br&amp;gt;&lt;br /&gt;
15.&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Friday, June 8 7:00am==&lt;br /&gt;
&amp;lt;b&amp;gt;PLEASE NOTE THAT THIS IS AN EARLY MORNING CLASS! &amp;lt;/b&amp;gt;&amp;lt;br&amp;gt;&lt;br /&gt;
1.&amp;lt;br&amp;gt;&lt;br /&gt;
2.&amp;lt;br&amp;gt;&lt;br /&gt;
3.&amp;lt;br&amp;gt;&lt;br /&gt;
4.&amp;lt;br&amp;gt;&lt;br /&gt;
5.&amp;lt;br&amp;gt;&lt;br /&gt;
6.&amp;lt;br&amp;gt;&lt;br /&gt;
7.&amp;lt;br&amp;gt;&lt;br /&gt;
8.&amp;lt;br&amp;gt;&lt;br /&gt;
9.&amp;lt;br&amp;gt;&lt;br /&gt;
10.&amp;lt;br&amp;gt;&lt;br /&gt;
11.&amp;lt;br&amp;gt;&lt;br /&gt;
12.&amp;lt;br&amp;gt;&lt;br /&gt;
13.&amp;lt;br&amp;gt;&lt;br /&gt;
14.&amp;lt;br&amp;gt;&lt;br /&gt;
15.&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Monday, June 11, 6:00pm==&lt;br /&gt;
1. Hidetoshi Inamine &amp;lt;br&amp;gt;&lt;br /&gt;
2. Dan Wu &amp;lt;br&amp;gt;&lt;br /&gt;
3. &amp;lt;br&amp;gt;&lt;br /&gt;
4. &amp;lt;br&amp;gt;&lt;br /&gt;
5. &amp;lt;br&amp;gt;&lt;br /&gt;
6. &amp;lt;br&amp;gt;&lt;br /&gt;
7. &amp;lt;br&amp;gt;&lt;br /&gt;
8. &amp;lt;br&amp;gt;&lt;br /&gt;
9. &amp;lt;br&amp;gt;&lt;br /&gt;
10.&amp;lt;br&amp;gt;&lt;br /&gt;
11.&amp;lt;br&amp;gt;&lt;br /&gt;
12.&amp;lt;br&amp;gt;&lt;br /&gt;
13.&amp;lt;br&amp;gt;&lt;br /&gt;
14.&amp;lt;br&amp;gt;&lt;br /&gt;
15.&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Tuesday, June 12, 6:00pm==&lt;br /&gt;
1. &lt;br /&gt;
&lt;br /&gt;
2.&amp;lt;br&amp;gt;&lt;br /&gt;
3.&amp;lt;br&amp;gt;&lt;br /&gt;
4.&amp;lt;br&amp;gt;&lt;br /&gt;
5.&amp;lt;br&amp;gt;&lt;br /&gt;
6.&amp;lt;br&amp;gt;&lt;br /&gt;
7.&amp;lt;br&amp;gt;&lt;br /&gt;
8.&amp;lt;br&amp;gt;&lt;br /&gt;
9.&amp;lt;br&amp;gt;&lt;br /&gt;
10.&amp;lt;br&amp;gt;&lt;br /&gt;
11.&amp;lt;br&amp;gt;&lt;br /&gt;
12.&amp;lt;br&amp;gt;&lt;br /&gt;
13.&amp;lt;br&amp;gt;&lt;br /&gt;
14.&amp;lt;br&amp;gt;&lt;br /&gt;
15.&amp;lt;br&amp;gt;&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Alfred_Hubler%27s_Nonlinear_Dynamics_Lab_2012&amp;diff=45573</id>
		<title>Alfred Hubler&#039;s Nonlinear Dynamics Lab 2012</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Alfred_Hubler%27s_Nonlinear_Dynamics_Lab_2012&amp;diff=45573"/>
		<updated>2012-06-03T19:09:17Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{Complex Systems Summer School 2012}}&lt;br /&gt;
&lt;br /&gt;
==Thursday, June 7, 6:00pm==&lt;br /&gt;
&lt;br /&gt;
1. Sarah Tweedt &amp;lt;br&amp;gt;&lt;br /&gt;
2. Georg F. Weber&lt;br /&gt;
3.&amp;lt;br&amp;gt;&lt;br /&gt;
4.&amp;lt;br&amp;gt;&lt;br /&gt;
5.&amp;lt;br&amp;gt;&lt;br /&gt;
6.&amp;lt;br&amp;gt;&lt;br /&gt;
7.&amp;lt;br&amp;gt;&lt;br /&gt;
8.&amp;lt;br&amp;gt;&lt;br /&gt;
9.&amp;lt;br&amp;gt;&lt;br /&gt;
10.&amp;lt;br&amp;gt;&lt;br /&gt;
11.&amp;lt;br&amp;gt;&lt;br /&gt;
12.&amp;lt;br&amp;gt;&lt;br /&gt;
13.&amp;lt;br&amp;gt;&lt;br /&gt;
14.&amp;lt;br&amp;gt;&lt;br /&gt;
15.&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Friday, June 8 7:00am==&lt;br /&gt;
&amp;lt;b&amp;gt;PLEASE NOTE THAT THIS IS AN EARLY MORNING CLASS! &amp;lt;/b&amp;gt;&amp;lt;br&amp;gt;&lt;br /&gt;
1.&amp;lt;br&amp;gt;&lt;br /&gt;
2.&amp;lt;br&amp;gt;&lt;br /&gt;
3.&amp;lt;br&amp;gt;&lt;br /&gt;
4.&amp;lt;br&amp;gt;&lt;br /&gt;
5.&amp;lt;br&amp;gt;&lt;br /&gt;
6.&amp;lt;br&amp;gt;&lt;br /&gt;
7.&amp;lt;br&amp;gt;&lt;br /&gt;
8.&amp;lt;br&amp;gt;&lt;br /&gt;
9.&amp;lt;br&amp;gt;&lt;br /&gt;
10.&amp;lt;br&amp;gt;&lt;br /&gt;
11.&amp;lt;br&amp;gt;&lt;br /&gt;
12.&amp;lt;br&amp;gt;&lt;br /&gt;
13.&amp;lt;br&amp;gt;&lt;br /&gt;
14.&amp;lt;br&amp;gt;&lt;br /&gt;
15.&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Monday, June 11, 6:00pm==&lt;br /&gt;
1. Hidetoshi Inamine &amp;lt;br&amp;gt;&lt;br /&gt;
2. Dan Wu &amp;lt;br&amp;gt;&lt;br /&gt;
3. &amp;lt;br&amp;gt;&lt;br /&gt;
4. &amp;lt;br&amp;gt;&lt;br /&gt;
5. &amp;lt;br&amp;gt;&lt;br /&gt;
6. &amp;lt;br&amp;gt;&lt;br /&gt;
7. &amp;lt;br&amp;gt;&lt;br /&gt;
8. &amp;lt;br&amp;gt;&lt;br /&gt;
9. &amp;lt;br&amp;gt;&lt;br /&gt;
10.&amp;lt;br&amp;gt;&lt;br /&gt;
11.&amp;lt;br&amp;gt;&lt;br /&gt;
12.&amp;lt;br&amp;gt;&lt;br /&gt;
13.&amp;lt;br&amp;gt;&lt;br /&gt;
14.&amp;lt;br&amp;gt;&lt;br /&gt;
15.&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==Tuesday, June 12, 6:00pm==&lt;br /&gt;
1. &lt;br /&gt;
&lt;br /&gt;
2.&amp;lt;br&amp;gt;&lt;br /&gt;
3.&amp;lt;br&amp;gt;&lt;br /&gt;
4.&amp;lt;br&amp;gt;&lt;br /&gt;
5.&amp;lt;br&amp;gt;&lt;br /&gt;
6.&amp;lt;br&amp;gt;&lt;br /&gt;
7.&amp;lt;br&amp;gt;&lt;br /&gt;
8.&amp;lt;br&amp;gt;&lt;br /&gt;
9.&amp;lt;br&amp;gt;&lt;br /&gt;
10.&amp;lt;br&amp;gt;&lt;br /&gt;
11.&amp;lt;br&amp;gt;&lt;br /&gt;
12.&amp;lt;br&amp;gt;&lt;br /&gt;
13.&amp;lt;br&amp;gt;&lt;br /&gt;
14.&amp;lt;br&amp;gt;&lt;br /&gt;
15.&amp;lt;br&amp;gt;&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Georg_F._Weber&amp;diff=45241</id>
		<title>Georg F. Weber</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Georg_F._Weber&amp;diff=45241"/>
		<updated>2012-05-08T20:41:43Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Georg F. Weber (born in Germany, now on the faculty in Cincinnati) is a cancer researcher, who has made contributions to the exploration of metastasis by defining the physiologic role of metastasis genes and by discovering the interaction between the molecules osteopontin and CD44. Georg has defined the genetic basis of metastasis formation as aberrant expression or splicing of a unique set of developmentally non-essential genes (stress response genes) that physiologically mediate the directed migration of immune system cells. &lt;br /&gt;
Early in his intellectual life, Georg wrote publications on chess and biomechanics. His medical career was initially focused on immunology, in particular on the regulation of host defenses through redox mechanisms. Among various phenomena, he identified signal transduction pathways inside T-lymphocytes that determine cell proliferation, programmed cell death, or immunosenescence. Georg’s enthusiasm for complexity research is based in part on his medical research and in part on his philosophical interests.&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=File:110321sGW056.jpg&amp;diff=45240</id>
		<title>File:110321sGW056.jpg</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=File:110321sGW056.jpg&amp;diff=45240"/>
		<updated>2012-05-08T20:36:44Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Georg_F._Weber&amp;diff=45239</id>
		<title>Georg F. Weber</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Georg_F._Weber&amp;diff=45239"/>
		<updated>2012-05-08T20:30:33Z</updated>

		<summary type="html">&lt;p&gt;WeberG: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Georg F. Weber (born in Germany, now on the faculty in Cincinnati) is a cancer researcher, who has made contributions to the exploration of metastasis by defining the physiologic role of metastasis genes and by discovering the interaction between the molecules osteopontin and CD44. Georg has defined the genetic basis of metastasis formation as aberrant expression or splicing of a unique set of developmentally non-essential genes (stress response genes) that physiologically mediate the directed migration of immune system cells. &lt;br /&gt;
Early in his intellectual life, Georg wrote publications on chess and biomechanics. His medical career was initially focused on immunology, in particular on the regulation of host defenses through redox mechanisms. Among various phenomena, he identified signal transduction pathways inside T-lymphocytes that determine cell proliferation, programmed cell death, or immunosenescence. Georg’s enthusiasm for complexity research is based in part on his medical research and in part on his philosophical interests.&lt;br /&gt;
[[File:C:\Desktop\110321sGW056.jpg]]&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
	<entry>
		<id>https://wiki.santafe.edu/index.php?title=Georg_F._Weber&amp;diff=45238</id>
		<title>Georg F. Weber</title>
		<link rel="alternate" type="text/html" href="https://wiki.santafe.edu/index.php?title=Georg_F._Weber&amp;diff=45238"/>
		<updated>2012-05-08T20:23:46Z</updated>

		<summary type="html">&lt;p&gt;WeberG: Created page with &amp;#039;Georg F. Weber (born in Germany, now on the faculty in Cincinnati) is a cancer researcher, who has made contributions to the exploration of metastasis by defining the physiologic…&amp;#039;&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Georg F. Weber (born in Germany, now on the faculty in Cincinnati) is a cancer researcher, who has made contributions to the exploration of metastasis by defining the physiologic role of metastasis genes and by discovering the interaction between the molecules osteopontin and CD44. Georg has defined the genetic basis of metastasis formation as aberrant expression or splicing of a unique set of developmentally non-essential genes (stress response genes) that physiologically mediate the directed migration of immune system cells. &lt;br /&gt;
Early in his intellectual life, Georg wrote publications on chess and biomechanics. His medical career was initially focused on immunology, in particular on the regulation of host defenses through redox mechanisms. Among various phenomena, he identified signal transduction pathways inside T-lymphocytes that determine cell proliferation, programmed cell death, or immunosenescence. Georg’s enthusiasm for complexity research is based in part on his medical research and in part on his philosophical interests.&lt;/div&gt;</summary>
		<author><name>WeberG</name></author>
	</entry>
</feed>