Santa Fe Institute Events Wiki - User contributions [en]

Motility in the Immune System: From Microscopic Movement to Macroscopic Function - Agenda

2015-07-30T14:55:53Z

Jucannon:

{{Motility in the Immune System: From Microscopic Movement to Macroscopic Function}}

Motility in the Immune System:
Microscopic Movement to Macroscopic Function
Working Group

July 29 – 30, 2015, 2015
Santa Fe Institute
1399 Hyde Park Road
Santa Fe, New Mexico

Co-organizers: Melanie Moses, Judy Cannon and Nitant Kenkre

Agenda

Wednesday, July 29, 2015

8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:30 Welcome and introduction
:::Melanie Moses (University of New Mexico) and Judy Cannon (University of New Mexico)

9:30 – 10:00 Immunology 1: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#CannonAbstract|T cell motility]] 
:::Judy Cannon (University of New Mexico)

10:00 – 10:30 Immunology 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MillerAbstract|T cell motility and the fibroblastic reticular network: monorails or monkey bars?]] 
:::Mark Miller (Washington University School of Medicine)

10:30 – 10:45 Coffee Break

10:45 – 11:15 Physics approaches 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#KenkreAbstract|Statistical Mechanical Techniques for Reaction Diffusion: Dynamics of Tethered Random Walkers ]] 
:::Nitant Kenkre (University of New Mexico)

11:15 – 11:45 Physics approaches 2 
:::Marcos G.E. da Luz (Universidade Federal do Paraná)

12:15 – 1:30 Lunch

1:30 – 2:00 Physics approaches 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#GiuggioliAbstract|From individual memory to environmental memory in interaction processes: animals as territorial random walkers]] 
:::Luca Giuggioli (University of Bristol)

2:00 – 2:30 Modeling 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MosesAbstract|Modeling T cell Activation in the Lymph Node as a Collective Foraging Problem ]] 
::: Melanie Moses (University of New Mexico)

2:30 – 3:00 Modeling 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#deBoerAbstract|Chemotaxis of Cytotoxic T cells in the Skin]] 
:::Rob de Boer (Utrecht University)

3:00 – 3:15 Coffee Break

3:15 – 3:45 Modeling 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#TextorAbstract|T Cell Migration: Biology, Analysis, and Clinical Relevance]] 
:::Johannes Textor (University of Utrecht)

3:45 – 4:15 Modeling 4: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#PerelsonAbstract|T cell Motility and the Cure of HIV]] 
:::Alan Perelson (Los Alamos National Laboratory)

4:15 – 5:15 Discussion

5:30 La Choza, 808 Alarid St., 505 982-0909

Thursday, July 30, 2015
8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:20 Lightning talks-Matthew

9:20 – 9:40 Lightning talks-Paul

9:40 – 10:30 Discussion-question 1

10:30 – 10:45 Coffee Break

10:45 – 12:00 Discussion-question 2

12:00 – 1:30 Lunch

1:30 – 2:20 Discussion-question 3

2:20 – 3:10 Discussion-question 4

3:10 – 3:30 Coffee Break

3:30 – 5:00 Paper and wrap up

5:00 End of meeting and departure

Motility in the Immune System: From Microscopic Movement to Macroscopic Function - Agenda

2015-07-30T02:34:21Z

Jucannon:

{{Motility in the Immune System: From Microscopic Movement to Macroscopic Function}}

Motility in the Immune System:
Microscopic Movement to Macroscopic Function
Working Group

July 29 – 30, 2015, 2015
Santa Fe Institute
1399 Hyde Park Road
Santa Fe, New Mexico

Co-organizers: Melanie Moses, Judy Cannon and Nitant Kenkre

Agenda

Wednesday, July 29, 2015

8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:30 Welcome and introduction
:::Melanie Moses (University of New Mexico) and Judy Cannon (University of New Mexico)

9:30 – 10:00 Immunology 1: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#CannonAbstract|T cell motility]] 
:::Judy Cannon (University of New Mexico)

10:00 – 10:30 Immunology 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MillerAbstract|T cell motility and the fibroblastic reticular network: monorails or monkey bars?]] 
:::Mark Miller (Washington University School of Medicine)

10:30 – 10:45 Coffee Break

10:45 – 11:15 Physics approaches 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#KenkreAbstract|Statistical Mechanical Techniques for Reaction Diffusion: Dynamics of Tethered Random Walkers ]] 
:::Nitant Kenkre (University of New Mexico)

11:15 – 11:45 Physics approaches 2 
:::Marcos G.E. da Luz (Universidade Federal do Paraná)

12:15 – 1:30 Lunch

1:30 – 2:00 Physics approaches 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#GiuggioliAbstract|From individual memory to environmental memory in interaction processes: animals as territorial random walkers]] 
:::Luca Giuggioli (University of Bristol)

2:00 – 2:30 Modeling 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MosesAbstract|Modeling T cell Activation in the Lymph Node as a Collective Foraging Problem ]] 
::: Melanie Moses (University of New Mexico)

2:30 – 3:00 Modeling 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#deBoerAbstract|Chemotaxis of Cytotoxic T cells in the Skin]] 
:::Rob de Boer (Utrecht University)

3:00 – 3:15 Coffee Break

3:15 – 3:45 Modeling 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#TextorAbstract|T Cell Migration: Biology, Analysis, and Clinical Relevance]] 
:::Johannes Textor (University of Utrecht)

3:45 – 4:15 Modeling 4: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#PerelsonAbstract|T cell Motility and the Cure of HIV]] 
:::Alan Perelson (Los Alamos National Laboratory)

4:15 – 5:15 Discussion

5:30 La Choza, 808 Alarid St., 505 982-0909

Thursday, July 30, 2015
8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:20 Lightning talks-Matthew

9:20 – 9:40 Lightning talks-Paul

9:40 – 10:30 Discussion-question 1

10:30 – 10:45 Coffee Break

10:45 – 11:05 Steph Forrest

11:05 – 12:00 Discussion-question 2

12:00 – 1:30 Lunch

1:30 – 2:20 Discussion-question 3

2:20 – 3:10 Discussion-question 4

3:10 – 3:30 Coffee Break

3:30 – 5:00 Paper and wrap up

5:00 End of meeting and departure

Motility in the Immune System: From Microscopic Movement to Macroscopic Function - Agenda

2015-07-30T02:33:16Z

Jucannon:

{{Motility in the Immune System: From Microscopic Movement to Macroscopic Function}}

Motility in the Immune System:
Microscopic Movement to Macroscopic Function
Working Group

July 29 – 30, 2015, 2015
Santa Fe Institute
1399 Hyde Park Road
Santa Fe, New Mexico

Co-organizers: Melanie Moses, Judy Cannon and Nitant Kenkre

Agenda

Wednesday, July 29, 2015

8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:30 Welcome and introduction
:::Melanie Moses (University of New Mexico) and Judy Cannon (University of New Mexico)

9:30 – 10:00 Immunology 1: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#CannonAbstract|T cell motility]] 
:::Judy Cannon (University of New Mexico)

10:00 – 10:30 Immunology 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MillerAbstract|T cell motility and the fibroblastic reticular network: monorails or monkey bars?]] 
:::Mark Miller (Washington University School of Medicine)

10:30 – 10:45 Coffee Break

10:45 – 11:15 Physics approaches 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#KenkreAbstract|Statistical Mechanical Techniques for Reaction Diffusion: Dynamics of Tethered Random Walkers ]] 
:::Nitant Kenkre (University of New Mexico)

11:15 – 11:45 Physics approaches 2 
:::Marcos G.E. da Luz (Universidade Federal do Paraná)

12:15 – 1:30 Lunch

1:30 – 2:00 Physics approaches 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#GiuggioliAbstract|From individual memory to environmental memory in interaction processes: animals as territorial random walkers]] 
:::Luca Giuggioli (University of Bristol)

2:00 – 2:30 Modeling 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MosesAbstract|Modeling T cell Activation in the Lymph Node as a Collective Foraging Problem ]] 
::: Melanie Moses (University of New Mexico)

2:30 – 3:00 Modeling 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#deBoerAbstract|Chemotaxis of Cytotoxic T cells in the Skin]] 
:::Rob de Boer (Utrecht University)

3:00 – 3:15 Coffee Break

3:15 – 3:45 Modeling 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#TextorAbstract|T Cell Migration: Biology, Analysis, and Clinical Relevance]] 
:::Johannes Textor (University of Utrecht)

3:45 – 4:15 Modeling 4: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#PerelsonAbstract|T cell Motility and the Cure of HIV]] 
:::Alan Perelson (Los Alamos National Laboratory)

4:15 – 5:15 Discussion

5:30 La Choza, 808 Alarid St., 505 982-0909

Thursday, July 30, 2015
8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:20 Lightning talks-Matthew

9:20 – 9:40 Lightning talks-Paul

9:40 – 10:30 Discussion-question 1

10:30 – 10:45 Coffee Break

10:45 – 11:05 Steph Forrest

11:05 – 12:00 Discussion-Steph Forrestquestion 2

12:00 – 1:30 Lunch

1:30 – 2:20 Discussion-question 3

2:20 – 3:10 Discussion-question 4

3:10 – 3:30 Coffee Break

3:30 – 5:00 Paper and wrap up

5:00 End of meeting and departure

Motility in the Immune System: From Microscopic Movement to Macroscopic Function - Agenda

2015-07-30T02:29:29Z

Jucannon:

{{Motility in the Immune System: From Microscopic Movement to Macroscopic Function}}

Motility in the Immune System:
Microscopic Movement to Macroscopic Function
Working Group

July 29 – 30, 2015, 2015
Santa Fe Institute
1399 Hyde Park Road
Santa Fe, New Mexico

Co-organizers: Melanie Moses, Judy Cannon and Nitant Kenkre

Agenda

Wednesday, July 29, 2015

8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:30 Welcome and introduction
:::Melanie Moses (University of New Mexico) and Judy Cannon (University of New Mexico)

9:30 – 10:00 Immunology 1: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#CannonAbstract|T cell motility]] 
:::Judy Cannon (University of New Mexico)

10:00 – 10:30 Immunology 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MillerAbstract|T cell motility and the fibroblastic reticular network: monorails or monkey bars?]] 
:::Mark Miller (Washington University School of Medicine)

10:30 – 10:45 Coffee Break

10:45 – 11:15 Physics approaches 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#KenkreAbstract|Statistical Mechanical Techniques for Reaction Diffusion: Dynamics of Tethered Random Walkers ]] 
:::Nitant Kenkre (University of New Mexico)

11:15 – 11:45 Physics approaches 2 
:::Marcos G.E. da Luz (Universidade Federal do Paraná)

12:15 – 1:30 Lunch

1:30 – 2:00 Physics approaches 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#GiuggioliAbstract|From individual memory to environmental memory in interaction processes: animals as territorial random walkers]] 
:::Luca Giuggioli (University of Bristol)

2:00 – 2:30 Modeling 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MosesAbstract|Modeling T cell Activation in the Lymph Node as a Collective Foraging Problem ]] 
::: Melanie Moses (University of New Mexico)

2:30 – 3:00 Modeling 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#deBoerAbstract|Chemotaxis of Cytotoxic T cells in the Skin]] 
:::Rob de Boer (Utrecht University)

3:00 – 3:15 Coffee Break

3:15 – 3:45 Modeling 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#TextorAbstract|T Cell Migration: Biology, Analysis, and Clinical Relevance]] 
:::Johannes Textor (University of Utrecht)

3:45 – 4:15 Modeling 4: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#PerelsonAbstract|T cell Motility and the Cure of HIV]] 
:::Alan Perelson (Los Alamos National Laboratory)

4:15 – 5:15 Discussion

5:30 La Choza, 808 Alarid St., 505 982-0909

Thursday, July 30, 2015
8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:30 Lightning talks-Matthew

9:30 – 10:00 Lightning talks-Paul

10:00 – 10:45 Discussion-question 1

10:45 – 11:00 Coffee Break

11:00 – 12:00 Discussion-question 2

12:00 – 1:30 Lunch

1:30 – 2:20 Discussion-question 3

2:20 – 3:10 Discussion-question 4

3:10 – 3:30 Coffee Break

3:30 – 5:00 Paper and wrap up

5:00 End of meeting and departure

Motility in the Immune System: From Microscopic Movement to Macroscopic Function - Agenda

2015-07-29T18:07:57Z

Jucannon:

{{Motility in the Immune System: From Microscopic Movement to Macroscopic Function}}

Motility in the Immune System:
Microscopic Movement to Macroscopic Function
Working Group

July 29 – 30, 2015, 2015
Santa Fe Institute
1399 Hyde Park Road
Santa Fe, New Mexico

Co-organizers: Melanie Moses, Judy Cannon and Nitant Kenkre

Agenda

Wednesday, July 29, 2015

8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:30 Welcome and introduction
:::Melanie Moses (University of New Mexico) and Judy Cannon (University of New Mexico)

9:30 – 10:00 Immunology 1: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#CannonAbstract|T cell motility]] 
:::Judy Cannon (University of New Mexico)

10:00 – 10:30 Immunology 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MillerAbstract|T cell motility and the fibroblastic reticular network: monorails or monkey bars?]] 
:::Mark Miller (Washington University School of Medicine)

10:30 – 10:45 Coffee Break

10:45 – 11:15 Physics approaches 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#KenkreAbstract|Statistical Mechanical Techniques for Reaction Diffusion: Dynamics of Tethered Random Walkers ]] 
:::Nitant Kenkre (University of New Mexico)

11:15 – 11:45 Physics approaches 2 
:::Marcos G.E. da Luz (Universidade Federal do Paraná)

12:15 – 1:30 Lunch

1:30 – 2:00 Physics approaches 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#GiuggioliAbstract|From individual memory to environmental memory in interaction processes: animals as territorial random walkers]] 
:::Luca Giuggioli (University of Bristol)

2:00 – 2:30 Modeling 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MosesAbstract|Modeling T cell Activation in the Lymph Node as a Collective Foraging Problem ]] 
::: Melanie Moses (University of New Mexico)

2:30 – 3:00 Modeling 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#deBoerAbstract|Chemotaxis of Cytotoxic T cells in the Skin]] 
:::Rob de Boer (Utrecht University)

3:00 – 3:15 Coffee Break

3:15 – 3:45 Modeling 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#TextorAbstract|T Cell Migration: Biology, Analysis, and Clinical Relevance]] 
:::Johannes Textor (University of Utrecht)

3:45 – 4:15 Modeling 4: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#PerelsonAbstract|T cell Motility and the Cure of HIV]] 
:::Alan Perelson (Los Alamos National Laboratory)

4:15 – 5:15 Discussion

5:30 La Choza, 808 Alarid St., 505 982-0909

Thursday, July 30, 2015
8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:30 Lightning talks-trainees (5min each)

9:30 – 10:40 Discussion-question 1

10:40 – 10:50 Coffee Break

10:50 – 12:00 Discussion-question 2

12:00 – 1:00 Lunch

1:00 – 2:10 Discussion-question 3

2:10 – 3:20 Discussion-question 4

3:20 – 3:30 Coffee Break

3:30 – 5:00 Paper and wrap up

5:00 End of meeting and departure

Motility in the Immune System: From Microscopic Movement to Macroscopic Function - Agenda

2015-07-29T18:03:15Z

Jucannon:

{{Motility in the Immune System: From Microscopic Movement to Macroscopic Function}}

Motility in the Immune System:
Microscopic Movement to Macroscopic Function
Working Group

July 29 – 30, 2015, 2015
Santa Fe Institute
1399 Hyde Park Road
Santa Fe, New Mexico

Co-organizers: Melanie Moses, Judy Cannon and Nitant Kenkre

Agenda

Wednesday, July 29, 2015

8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:30 Welcome and introduction
:::Melanie Moses (University of New Mexico) and Judy Cannon (University of New Mexico)

9:30 – 10:00 Immunology 1: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#CannonAbstract|T cell motility]] 
:::Judy Cannon (University of New Mexico)

10:00 – 10:30 Immunology 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MillerAbstract|T cell motility and the fibroblastic reticular network: monorails or monkey bars?]] 
:::Mark Miller (Washington University School of Medicine)

10:30 – 10:45 Coffee Break

10:45 – 11:15 Physics approaches 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#KenkreAbstract|Statistical Mechanical Techniques for Reaction Diffusion: Dynamics of Tethered Random Walkers ]] 
:::Nitant Kenkre (University of New Mexico)

11:15 – 11:45 Physics approaches 2 
:::Marcos G.E. da Luz (Universidade Federal do Paraná)

11:45 – 12:15 Physics approaches 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#GiuggioliAbstract|From individual memory to environmental memory in interaction processes: animals as territorial random walkers]] 
:::Luca Giuggioli (University of Bristol)

12:15 – 1:30 Lunch

1:30 – 2:00 Modeling 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MosesAbstract|Modeling T cell Activation in the Lymph Node as a Collective Foraging Problem ]] 
::: Melanie Moses (University of New Mexico)

2:00 – 2:30 Modeling 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#deBoerAbstract|Chemotaxis of Cytotoxic T cells in the Skin]] 
:::Rob de Boer (Utrecht University)

2:30 – 3:00 Coffee Break

3:00 – 3:30 Modeling 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#TextorAbstract|T Cell Migration: Biology, Analysis, and Clinical Relevance]] 
:::Johannes Textor (University of Utrecht)

3:30 – 4:00 Modeling 4: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#PerelsonAbstract|T cell Motility and the Cure of HIV]] 
:::Alan Perelson (Los Alamos National Laboratory)

4:00 – 5:15 Discussion

5:30 La Choza, 808 Alarid St., 505 982-0909

Thursday, July 30, 2015
8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:30 Lightning talks-trainees (5min each)

9:30 – 10:40 Discussion-question 1

10:40 – 10:50 Coffee Break

10:50 – 12:00 Discussion-question 2

12:00 – 1:00 Lunch

1:00 – 2:10 Discussion-question 3

2:10 – 3:20 Discussion-question 4

3:20 – 3:30 Coffee Break

3:30 – 5:00 Paper and wrap up

5:00 End of meeting and departure

Motility in the Immune System: From Microscopic Movement to Macroscopic Function - Agenda

2015-07-29T17:32:50Z

Jucannon:

{{Motility in the Immune System: From Microscopic Movement to Macroscopic Function}}

Motility in the Immune System:
Microscopic Movement to Macroscopic Function
Working Group

July 29 – 30, 2015, 2015
Santa Fe Institute
1399 Hyde Park Road
Santa Fe, New Mexico

Co-organizers: Melanie Moses, Judy Cannon and Nitant Kenkre

Agenda

Wednesday, July 29, 2015

8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:30 Welcome and introduction
:::Melanie Moses (University of New Mexico) and Judy Cannon (University of New Mexico)

9:30 – 10:00 Immunology 1: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#CannonAbstract|T cell motility]] 
:::Judy Cannon (University of New Mexico)

10:00 – 10:30 Immunology 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MillerAbstract|T cell motility and the fibroblastic reticular network: monorails or monkey bars?]] 
:::Mark Miller (Washington University School of Medicine)

10:30 – 10:45 Coffee Break

10:45 – 11:15 Physics approaches 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#KenkreAbstract|Statistical Mechanical Techniques for Reaction Diffusion: Dynamics of Tethered Random Walkers ]] 
:::Nitant Kenkre (University of New Mexico)

11:15 – 11:45 Physics approaches 2 
:::Marcos da Luz (Universidade Federal do Paraná)

11:45 – 12:15 Physics approaches 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#GiuggioliAbstract|From individual memory to environmental memory in interaction processes: animals as territorial random walkers]] 
:::Luca Giuggioli (University of Bristol)

12:15 – 1:30 Lunch

1:30 – 2:00 Modeling 1 [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#MosesAbstract|Modeling T cell Activation in the Lymph Node as a Collective Foraging Problem ]] 
::: Melanie Moses (University of New Mexico)

2:00 – 2:30 Modeling 2: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#deBoerAbstract|Chemotaxis of Cytotoxic T cells in the Skin]] 
:::Rob de Boer (Utrecht University)

2:30 – 3:00 Coffee Break

3:00 – 3:30 Modeling 3: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#TextorAbstract|T Cell Migration: Biology, Analysis, and Clinical Relevance]] 
:::Johannes Textor (University of Utrecht)

3:30 – 4:00 Modeling 4: [[Motility_in_the_Immune_System:_From_Microscopic_Movement_to_Macroscopic_Function_-_Abstracts#PerelsonAbstract|T cell Motility and the Cure of HIV]] 
:::Alan Perelson (Los Alamos National Laboratory)

4:00 – 5:15 Discussion

5:30 La Choza, 808 Alarid St., 505 982-0909

Thursday, July 30, 2015
8:15 Shuttle departs from Hotel Santa Fe

8:30 – 9:00 Continental Breakfast at SFI

9:00 – 9:30 Lightning talks-trainees (5min each)

9:30 – 10:40 Discussion-question 1

10:40 – 10:50 Coffee Break

10:50 – 12:00 Discussion-question 2

12:00 – 1:00 Lunch

1:00 – 2:10 Discussion-question 3

2:10 – 3:20 Discussion-question 4

3:20 – 3:30 Coffee Break

3:30 – 5:00 Paper and wrap up

5:00 End of meeting and departure

Talk:Motility in the Immune System: From Microscopic Movement to Macroscopic Function - Abstracts

2015-07-29T17:24:02Z

Jucannon:

Questions posed by participants:

Judy:
Do DCs “attract” T cells? How can we answer this experimentally or through modeling? What approaches can be used to understand cell-cell interaction/communication?

What environmental factors contribute to determining the type of search/motion taken by T cells? How do we quantitate and model these environmental influences?

What do we know about 2D vs 3D motion in other systems? Are there differences and are there models to assess these differences?

Luca:

First question for discussion:

Should a T-cell be thought of an isolated individual or are there collective or population phenomena critical to perform their tasks?

Although it is natural to start simple and hypothesize that a process occur in isolation, is there evidence that T-cells behave in the same way if in very small numbers. Modelling approaches may change dramatically if movement processes need to account for interactions with other members of a population.

Second question for discussion:

How does a single T-cell move and interact with its environment?

Before venturing to model the movement a T-cell, it is important to understand how it moves over a substrate and what are the minimal features necessary to represent its motion. Is it a fundamental mistake considering a T-cell a point particle? What is the spatial extent of a T-cell relative to the distance it travels, or relative to the spatial heterogeneity it encounters? How does it move, what cues does it react to?

Rob:

What is the role of chemotaxis of CTL within infected tissues?

Nitant:

How can formalism from physics which has informed many fields benefit the study of T cell motility?

What precise observations have been made of T cell motion?

What quantitative measures of the so-called reactions rates, versus motion rates, have been done for T cell motion?

Talk:Motility in the Immune System: From Microscopic Movement to Macroscopic Function - Abstracts

2015-07-29T16:58:01Z

Jucannon: Created page with "Questions posed by participants: Judy: Do DCs “attract” T cells? How can we answer this experimentally or through modeling? What approaches can be used to understand cell..."

Motility in the Immune System: From Microscopic Movement to Macroscopic Function - Participants

2015-07-28T22:43:36Z

Jucannon:

{{Motility in the Immune System: From Microscopic Movement to Macroscopic Function}}
Melanie Moses—UNM CS

Judy Cannon—UNM HSC

Nitant Kenkre—UNM Physics

Rob de Boer—Utrecht/SFI

Mark Miller—Wash U St. Louis

Luca Giuggioli—U of Bristol

Marcos da Luz—Univ. Fed. do Parana Brazil

Steph Forrest—UNM CS/SFI

Alan Perelson—LANL/SFI

Johannes Textor—Utrecht

Paul Mrass—UNM HSC (postdoc)

Matthew Fricke—UNM CS (graduate student)

Satomi Sugaya—UNM Physics (graduate student)

Matt Chase—UNM Physics (graduate student)

Motility in the Immune System: From Microscopic Movement to Macroscopic Function - Agenda

2015-07-28T22:34:13Z

Jucannon: