Santa Fe Institute Events Wiki - User contributions [en]

Presentations 2012

2012-06-27T20:03:04Z

Inamine:

{{Complex Systems Summer School 2012}}

9:00 - 9:15: Christa Brelsford and Xin Lu: Changes in Social Network Structure in Response to Crisis: Using Twitter data to Explore the Effect of the Tōhoku Earthquake.

9:15 - 9:30: Piotr Milanowski and Georg F. Weber: Enzyme kinetics and the outcome of chemical reactions.

9:30 - 9:45: Fabio, Elena, Tom and Friederike: Collaboration in times of stress: an Agent Based Modelling approach

9:45 - 10:00: Joanne, Vikram, Matteo, Sanith: Price-time Dynamics of Contracts Traded on Prediction Markets

10:15 - 10:45: BREAK

10:45 - 11:00: Katrien, Jasmeen, Sandro, Cameron, Vanessa

11:15 - 11:30: Xue, Χλοε, Xiaoli

11:30 - 11:45: Seth, Daniel, Cameron: flocking in iterated reasoning.

12:00: Group Photo

12:15 - 1:15: LUNCH

1:15 - 1:30: Andres, Charlie, Gareth, and Nic G: We Got the Skills to Pay the Bills - Exploring the Link Between Occupation Diversity and Innovation

1:30 - 1:45: Xin and Abby: Use Entropy as a Measure of Traceability for Food Supply Networks

1:45 - 2:00: Sepehr

2:00 - 2:15: Ben, Laurent, Oscar, Georg: The Targeting and Timing of Treatment Influences the Emergence of Influenza Resistance in Structured Populations

2:15 - 2:30: Georg, Ben, Laurent, Oscar: Escaping the Poverty Trap: Modeling the Interplay Between Economic Growth and the Ecology of Infectious Disease

2:30 - 2:45: Ian, Marco, Oleksandr and Xin: Space of complex networks and robustness

2:45 - 3:00: BREAK

3:00 - 3:15: Marco and Matteo: Trade network formation: the role of technology and geography

3:15 - 3:30: Riccardo and Priya:

3:30 - 3:45: Nick A., Keegan, Matteo, Vikram, Sarah, Mark: Learning in Random Boolean Networks

3:45-4:00: Si, Miguel, Hide, Sarah: The Robustness, Stability and Persistence of Niche-Structured Food Webs

5:00: Final Remarks & Farewell Dinner

Complex Systems Summer School 2012-Project Presentations

2012-06-27T20:01:02Z

Inamine:

{{Complex Systems Summer School 2012}}

Use this space to post project presentations and outlines. Include group members, a brief outline, and your slides.

[[Presentations 2012|SCHEDULE OF PRESENTATIONS SIGN-UP]]
=== The Robustness, Stability and Persistence of Niche-Structured Food Webs ===

Si, Miguel, Hide, Sarah

We are interested in the properties of food webs, a network structure describing who eats whom within an ecological community. Study of species-species interactions in these networks has been dominated by a focus on predator-prey relationships. In 2000, William and Martinez proposed the niche model, which generates synthetic food web structures by ordering species according to ‘niche values’ and assigning trophic relationships by allowing consumers to feed on the species whose niche values fall within a particular range. The niche model has successfully replicated many properties of empirical food webs.

However, whether the niche organization in food webs tends to produce more diverse, stable, robust and persistent communities remains unknown. In this study, we randomly generated food webs in which predator-prey links are formed according to the niche model and contrasted these with unstructured food webs in which predator-prey links are randomly assigned among species. We used the bioenergetic model to produce persisting food webs of both structural types. In the presentation on Friday, we will show a few preliminary results, such as the difference of the two types of food webs in complexity, robustness and stability.

Human impacts upon ecosystems – for example, the introduction of invasive species or the disturbance of the system and subsequent loss of species – may lead to collapse of entire ecological communities. We will continue to explore the persistence of these dynamic food webs under environmental perturbation after the summer school. We also plan to explore a separate structural model to study how the evolution of networks on both micro- and macroevolutionary timescales could possibly contribute to stability.

=== Price-time Dynamics of Contracts Traded on Prediction Markets ===

Joanne, Vikram, Matteo, Sanith

Prediction markets have been shown to outperform traditional methods of polls and opinion surveys in forecasting future events. The futures contracts traded in these markets assess the expectation of occurrence of a variety of events spread across multiple domains (political, economic, entertainment, financial and weather). We explore the feasibility of 'predicting' the outcome of binary true/false prediction market contracts ahead of their expiry date using a neural-network based machine learning approach. In addition we focus on the characteristics of political-based contracts to establish whether they exhibit characteristic 'fundamental' properties.

=== How Complex Languages Replicate through Simple Brains ===

Katrien, Vanessa, Sandro, Cameron, Jasmeen

Through the use of an iterated learning experiment, we investigated the transmission of a "high entropy", randomised initial language through successive generations of participants. We want to see what features of the language replicated most easily, and what structure emerged by the end of the chain. Our hypothesis is that the language converges to a "low entropy" equilibrium state with a minimal number of words, morphemes, and form-meaning distinctions.

=== Collaboration in times of stress: an Agent Based Modelling approach ===

Fabio Cresto Aleina, Elena del Val, Tom Fennewald and Friederike Greb

We want to investigate the influence of exogenous stress on cooperative behaviour. We propose an agent based model in which the agents can be interpreted as farmers living in a water limited environment. With changes in precipitation patterns, the farmers undergo stress, and we observe how this impacts relationships among farmers and their properties.

=== Simple variation of the logistic map as a model to invoke questions on cellular protein trafficking ===
(Sepehr Ehsani, http://arxiv.org/abs/1206.5557)

Many open problems in biology, as in the physical sciences, display nonlinear and 'chaotic' dynamics, which, to the extent possible, cannot be reasonably understood. Moreover, mathematical models which aim to predict/estimate unknown aspects of a biological system cannot provide more information about the set of biologically meaningful (e.g., 'hidden') states of the system than could be understood by the designer of the model ab initio. Here, the case is made for the utilization of such models to shift from a 'predictive' to a 'questioning' nature, and a simple natural-logarithm variation of the logistic polynomial map is presented that can invoke questions about protein trafficking in eukaryotic cells.

===Changes in Social Network Structure in Response to Crisis: Using Twitter data to Explore the Effect of the Tōhoku Earthquake.===

Christa Brelsford and Xin Lu

Abstract:
We use twitter data from 7 days before and after the Tōhoku Earthquake to explore how cooperation rates, social network structure and connectivity, and social network vulnerability changed in Japan in response to the disaster. An English language data set is collected for the same time period to use as a control. Data is collected for a period of 96 hours starting from March 4th 2011 2:46pm JST and for 96 hours beginning March 11th 2011 2:46 pm JST. The rate of cooperative behavior, measured by the occurrence of helping words in tweets increases slightly in the English dataset and by an order of magnitude in the Japanese dataset. A network analysis is also performed. Network edges are retweets and direct messages. In future work, we hope to explore whether problem solving capacity in a social system changes in response to crises, based on changes in the rate of cooperation and information transfer in a network.

=== The CSSS Network ===

Tom & Riccardo (with JP and others)

We will investigate the questions you are dying to know: What interesting interactions are revealed from the first 3 weeks of the Complex System Summer School survey? Have barriers between academic disciplines been broken down? Do power laws fit the data!? ...

Let us know if you have specific questions or if you would like to be involved in data analysis!

=== Is there a method in the madness? the dynamic structures of human language use ===

Priya and Riccardo

Psychiatric anecdotal reports point to the monotony, lack of emotion and sometimes intelligibility in many clinical populations. Linear measures of fluency and prosody, however, present only controversial differences between patients and healthy controls and only in unnatural phonations (i.e. say "aaaaa" for 30 secs).
We therefore go complex and chaotic on a set of more ecological recordings and transcriptions from 4 clinical populations (Asperger's, Schizophrenics, Depressed and Right Hemisphere Damage patients) as well as from healthy controls.
We then set a classifier-driven race: will non-linear analyses outcompete linear analyses in discriminating between pathologies?

=== Escaping the Poverty Trap: Modeling the Interplay Between Economic Growth and the Ecology of Infectious Disease ===

Georg, Ben, Laurent, Oscar

The dynamics of economies and infectious disease are inexorably linked: economic well-being influences health (sanitation, nutrition, etc) and health influences economic well-being (labor productivity lost to sickness and disease). Often societies are locked into "poverty traps" of poor health and poor economy. Here, we demonstrate poverty traps formed in models of infection and endogenous growth, as well as ways to break out of poverty traps. We explore two mechanisms of escape: one, through an influx of capital, and another through changing the percentage of GDP spent on healthcare. We find large influxes of capital is successful, but increasing health spending does not. Our results have important policy implications in the distribution of aid and within-country healthcare spending.

=== The Targeting and Timing of Treatment Influences the Emergence of Influenza Resistance in Structured Populations ===

Ben, Laurent, Oscar, Georg

Evolution of antiviral resistance in influenza carries large societal impacts through morbidity and mortality caused by treatment failure. Several previous studies put forth theory regarding the optimal timing, targeting and absolute level of treatment in populations. Few of these studies, however, have considered populations with explicit structure. Here we present a model of antiviral resistance on networks and explore the timing, targeting and levels of treatment. Interestingly, we find bistability as a result of treatment leading to the existence of an unstable manifold, above which successful treatment (i.e.: no resistance) is impossible. We find, contrary to previous results, that degree-targeted treatment is not optimal, and leads to higher levels of resistance than random treatment. Additionally, in accordance with previous results, we find an optimum level of treatment which is less than 100%. These findings findings have important consequences in guiding policy behind influenza treatment. The bistability indicates that caution should be taken when treating populations when the absolute numbers of infections are unknown. Positively, our results indicate that putting resources into targeted treatment is not necessary, random treatment is preferable.

=== Learning in Random Boolean Networks ===

Nick A., Keegan, Matteo, Vikram, Sarah, Mark

Inspired by biochemical networks which adapt on evolutionary timescales, neural networks that adapt during development and learning, and universal computation in cellular automata, we have implemented several models of learning in Random Boolean Networks (RBNs) in order to better understand the relationships between network structure, node interaction rules, and network output.

=== Enzyme Catalysis and the Outcome of Chemical Reactions ===
Piotr and Georg W.
Enzymes are catalysts that accelerate chemical reactions but do not affect their outcome. This traditional paradism was developed under artificail test tube conditions. Our project investigates the possibility that the presence of an enzyme can alter the course of a reaction if it takes place under more physiologic conditions.

=== How Does a Stochastic Environment affect Community Assembly? ===

Xue, Χλοε, Xiaoli

We are interested in how exogenous temporal variability in resource availability affects the community structure of organisms with different resource-use strategies. Organisms induce additional resource stress on each other through competition. This is an abstraction of an arid environment with unreliable rainfall; the organisms themselves have been abstracted to four unitless parameters that allocate their resources to different parts of their lifecycles. The system has memory, as the previous presence of an organism affects the resource transport mechanism (an abstraction of soil).

=== How Does a Network’s Structure Influence its Traceability? ===

Xin and Abby

We are interested in systematically studying the problem of finding the source of a contamination spread through a network. We model a contamination spreading through the food distribution network, which we represent by interconnections between farmers, distributors, and retailers, and construct an estimator for the outbreak source given only this structure. We show how the ability of the estimator to narrow down the source identification problem changes with the connectivity and the number of observations. We propose a measure for traceability, or the overall ability to identify the source of spreading given any set of outbreak observations, based on entropy. We show how this measure appropriately reflects the range of uncertainty in identifying the source. We believe this measure may be useful in the design of networks that are conducive to accurate identification of the source of contamination.

=== We Got the Skills to Pay the Bills: Exploring the Link Between Occupation Diversity and Innovation===

Andrés, Charlie, Gareth, and Nick

Where does diversity in skills or occupations come from and why does it lead to more innovative cities? Previous work in this area has shown that there is a scaling behaviour which allows citizens of larger cities to earn an extra 15% in income whilst making use of 15% fewer gas stations, for example. Making use of occupation, patent, and population data of US Metropolitan Statistical Areas (MSA), we try to understand what factors make successful cities. Here we assume that successful cities are those cities which are most innovative as determined by the production of patents. In addition we use agent-based modelling to explore how and why people acquire new skills and whether this leads to more productive cities.

=== Space of complex networks and robustness ===
Ian, Marco, Xin, and Oleksandr

Complex networks have various properties which can be measured in real networks (WWW, social networks, biological networks), e.g. degree distribution, modularity, hierarchy, assortativity etc. Robustness of complex networks is a big question, however only some progress have been done in this direction. For example, it was shown that the scale-free networks are much more topologically robust to random attacks than random networks. Various characteristics of complex networks might influence the robustness differently. The question is how?

We generated continuous topological space of networks with respect to degree distribution (from random to scale-free) and clustering (from none to high). Then we attacked the network by removing vertices randomly and highly connected (hubs). The next step is to calculate network robustness, it is non-trivial task because there are many different ways to do it. So far we calculate the size of giant component during attack process for the entire space.

=== Trade network formation: the role of technology and geography ===

Marco and Matteo

Geography and technology play important roles in economic activities, e.g. international trade flows diminish dramatically with distance; salaries, prices, and factor endowments vary across locations; and productivities are really different across countries' industries. International trade theories have gained some non-negligible reputation explaining the sizes of aggregated trade flows, nonetheless few attention has being payed to the formation of the bilateral trade relations. We develop a network formation model that incorporates differences in technological capabilities across countries and the effect of the geographical distance as a proxy of trade barriers.

===Cultural Evolution of Literary Genres===

Graham, Dan, Benji, Nona

Summary: This project explores the dynamics of cultural evolution using a case study: the rise and differentiation of literary genres. Genres are modeled as feature sets that may undergo gene-like mutations and are subject to the selective pressure of consumer preferences. We also hope to include the impact of institutional actors.

Methods: Agent Based Modeling, Genetic Algorithms, Cluster Analysis, Phylogenetics

===Emergence of Money through an agent based model===
Aleksandra, David, Jianfeng, Vikram

We start from a well known model by Kiyotaki and Moore which shows the emergence of money in a homogeneous population and explore how heterogeneity affects this emergence through an agent based model.

===Level-k thinking, collective behavior, and limit cycles===
Seth, Daniel, Cameron

What do all those things have in common? That's what we're trying to figure out. The sub-presentations of this project are satellites around an experimental result showing that the individual-level heuristic adjustment of what-you-think-I-think-you-think behavior leads to a group-level collective behavior that drives a periodic trajectory through the strategy space of Rock-Paper-Scissors. We will have an analysis of the data, an agent-based model establishing sufficient conditions, and a sketch of an analytic result modeling this phenomenon as symmetry-breaking.

Complex Systems Summer School 2012-Tutorials

2012-06-19T20:01:22Z

Inamine: /* Non-linear measures of correlation */

{{Complex Systems Summer School 2012}}

CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials.

Also, please post requests for tutorials here.

==Fractal Tutorial??==

Hi, I have a request for a tutorial: Could anyone who has the expertise please teach a tutorial on fractal theory and codes to generate some?
Thanks! -Jasmeen

==Python online materials==
[Follow up to Ryan's tutorial..]

Here you have some useful online references for getting started in Python.

=== Google's Python Class ===
* A ''[...] free class for people with a little bit of programming experience who want to learn Python. The class includes written materials, lecture videos, and lots of code exercises to practice Python coding [...]''
* http://code.google.com/edu/languages/google-python-class/

=== Numpy, Scipy and Matplotlib tutorials ===
* I.e.: all the things you typically do in Matlab done in Python..
* NumPy tutorial: http://www.scipy.org/Tentative_NumPy_Tutorial
* Matplotlib tutorial: http://matplotlib.sourceforge.net/users/pyplot_tutorial.html
* Numpy for Matlab Users (extremely useful!!!): http://www.scipy.org/NumPy_for_Matlab_Users

=== NetworkX ===
* I.e.: network analysis in Python
* NetworkX tutorial: http://networkx.lanl.gov/tutorial/index.html

=== Enthought Python Distribution ===
* ''The Enthought Python Distribution provides scientists with a comprehensive set of tools to perform rigorous data analysis and visualization. Python, distinguished by its flexibility, coherence, and ease-of-use, is rapidly becoming the programming language of choice for researchers worldwide. EPD extends this capacity with a powerful collection of Python libraries to enable interactive technical computing and cross-platform rapid application development.''
* It is free (!!!): http://www.enthought.com/products/edudownload.php

=== Additional References ===
* Py4Science: a Starter Kit (by Fernando Perez, U.C. Berkeley)
* http://fperez.org/py4science/starter_kit.html

Hope this helps,

Matteo

==Non-linear measures of correlation==

I have been working on how to quantify the reciprocal interaction of time-series over time. I am using Recurrence Plots (http://www.recurrence-plot.tk/glance.php). If anybody is interested in discussing this method, I am willing to prepare a small tutorial on what recurrence plots are and how I have been using them.

Riccardo (fusaroli@gmail.com)

- Matteo

- Oleksandr krystoferivanov@gmail.com

- Priya

- Friederike

- Miguel

- Vikram

- Hide

==Intro to Philosophy of Science==

Hi All, I've heard some interest in having a more structured/rigorous intro to ideas in the philosophy of science. I'd be happy to briefly explain some of the classic theories as well as some more recent views due to, e.g. Bas Van Fraassen, James Ladyman, Nancy Cartwright, and we could have a small (moderated!) group discussion. Sign up if interested... -Jasmeen

- Hide is interested and has a crush on Engels

- Friederike

- Matteo

- Vikram

- Mikkel

- Mark (!)

-Keegan is down

-Xiaoli

- Georg W.

- Priya

- Miguel

==Markov Chain Monte Carlo==
If anyone is interested in talking more about Bayesian methods and MCMC implementation, I'd be happy to put something together. - Keegan

-Hide is interested in this!

-Abby

-Joanne

-Oscar

-Vanessa

-Jasmeen

-Georg

-Nona

-benji

-Riccardo

-Matteo

-Cameron

- Priya

-Xiaoli

- Vikram

- Miguel

==Python, Computational Mechanics, and Information Theory==

There has been interest in more discussion on a number of topics, and so i'm offering to have evening discussions on them. please sign up below so that i can get a feel for the number of people who would be attending. also, please put a preference for what day it should be.

===Python===
Sign up below if you'd like an introduction to basic python programming. Python is a general purpose, very flexible and useful programming language. It is used pretty extensively in scientific computing.

dan wu: wu12345@gmail.com Let me know when we're meeting

- Benji: bzusman@gmail.com 

-Keegan keegan.hines@gmail.com

-Christa (maybe- I'm competent at the very basics, but could still use some help)

- Riccardo: fusaroli@gmail.com

- Oleksandr: krystoferivanov@gmail.com

- Nona: nona.karalashvili@gmail.com

- Xiaoli: xiaolidong2008@gmail.com

- Abby: Abbyhorn@Mit.edu

- Marco: maduenase@gmail.com

- Nick: goudemand at pim dot uzh dot ch

- Fabio: fabio.cresto-aleina@zmaw.de

- Joanne: joannerodrigues@berkeley.edu

- Hide: hi55 at cornell dot edu

- Priya: iitm.priya@gmail.com

- Miguel: miguel.lurgi@icm.csic.es

- Oscar: opatters@asu.edu

- Vanessa: vanferdi at gmail dot com

- Georg G: gmg at stat dot cmu dot edu dot notthelastpart

- Oleksandr: krystoferivanov@gmail.com

===Information Theory===
Interested in turning your data into bits, or seeing how the bits over there are related to the bits over here? If so, sign up below.

- Matteo

- Benji: bzusman@gmail.com

-Keegan keegan.hines@gmail.com

-Riccardo

-Christa

- Katrien

- Xiaoli

- Abby

- Jasmeen

- Hide

- Sanith

- Priya

- Georg W.

- Piotr

- Miguel

- Oscar

- Vanessa

- Nona

- Georg G.

- Oleksandr krystoferivanov@gmail.com

===Computational Mechanics===
If you'd like to know more about epsilon machines, measures of complexity, how to go from a map to a machine, i'm happy to discuss it all. 
- Matteo

Yes please! --Chloe

-Keegan keegan.hines@gmail.com

-Christa

-Xiaoli

-Jasmeen

-Hide

-Sanith

- Priya

- Georg W.

-Piotr

-Ian

- Miguel

- Oscar

- Abby

- Georg G.

- Riccardo.

==Order Book Dynamics: Learn how to trade in 15min==

--I'm happy to repeat this -just get in touch with me.--

If you are curious about how stocks trade and want to try your luck, I'll
be going over some of the basics with a hands-on example.

Meet at 7.30pm in main lecture hall Thursday June 7th. Please make sure
to bring your laptop.

Sanith

==Update==

Hi guys

I guess the main lecture hall is free at 6.30 pm and so we can meet there. I have a small talk through the idea and then maybe we can try out getting bifurcation plots for one or two systems. I use software written in MATLAB for the demo but the idea can be implemented in any software.

Here's a link to the [[software for numerical continuation|http://twr.cs.kuleuven.be//research/software/delay/notice.shtml]]. This software can handle systems with time delays and can be used to obtain the bifurcation behaviour.

(1) Please download the software DDE-BIFTOOL and unzip.

(2) Within the folder, you will find another zipped folder in small case ‘ddebiftool’. Please unzip this into a folder with the same name

(3) Add the location of the folder to the path of MATLAB.
I have also sent out a mail with a zipped folder containing files to get a bifurcation plot for a Rijke tube system.
Do let me know if anyone did not get this.
See you there!

Priya

==An easier way to get a bifurcation plot==

Hey guys
I have been working in the past in obtaining bifurcation plots for different physical systems. There's a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called ''numerical continuation'' and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at '''iitm.priya@gmail.com''' or sign up below.
[[User:Priya|Priya]]

- [[Ryan James|Ryan]] is interested in this. 
- Riccardo is interested in this. 
- Vikram is interested in this. 
- Matteo is interested in this. 
- Hide is interested in this. 
- Katrien wants to hear more about this. 
- Cameron is interested in this and would like to see [http://itunes.apple.com/us/app/xpp/id433859546?mt=8 this] in action if anyone has an iPad. 
- Oscar is interested in this. 
- Charlie is interested in this. (I've done this once for a paper.) 
- Georg W. is interested in this 

==Using Tisean on R on OS X==
first install TISEAN, like you've done already. Make sure R is up to date (v 2.15).
you can try to install RTisean from CRAN
install.packages("RTisean"); library(RTisean); henon()
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-
Solution:
remove.packages("RTisean")
restart R
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n
install it, it changes line 74 of nativeTISEAN.R which has some problems with file handling
If you are golden, then:
> henon()
V1 V2
[1,] -0.1232481 -1.030383

==A conceptual shell==

One thing that I think has been missing from this course is an explicit set of concepts and tools which we can use to relate all of the talks we've been listening to. Last fall, two other graduates students and I taught a survey course on complexity. We put together the following document, which contains one-paragraph summaries of what we felt were the 20 most important concepts that comprised the field of complexity. These were the "glue" that we used to relate all of our lectures and workshops. Most of these will probably be familiar to you, but I think they serve as a nice, concise reference and may be helpful in tying all of this information overload together. One caveat: These are works in progress and are in alphabetical rather than any logical conceptual order.

[[Media:Topics_in_Complexity_Foundational_Definitions.pdf]]

Cheers,
Mark Longo

Complex Systems Summer School 2012-Tutorials

2012-06-16T19:57:09Z

Inamine: /* Intro to Philosophy of Science */

{{Complex Systems Summer School 2012}}

CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials.

Also, please post requests for tutorials here.

==Intro to Philosophy of Science==

Hi All, I've heard some interest in having a more structured/rigorous intro to ideas in the philosophy of science. I'd be happy to briefly explain some of the classic theories as well as some more recent views due to, e.g. Bas Van Fraassen, James Ladyman, Nancy Cartwright, and we could have a small (moderated!) group discussion. Sign up if interested... -Jasmeen

-Hide is interested and has a crush on Engels

==Markov Chain Monte Carlo==
If anyone is interested in talking more about Bayesian methods and MCMC implementation, I'd be happy to put something together. - Keegan

-Hide is interested in this!

-Abby

-Joanne

-Oscar

-Vanessa

-Jasmeen

-Georg

-Nona

==Python, Computational Mechanics, and Information Theory==

There has been interest in more discussion on a number of topics, and so i'm offering to have evening discussions on them. please sign up below so that i can get a feel for the number of people who would be attending. also, please put a preference for what day it should be.

===Python===
Sign up below if you'd like an introduction to basic python programming. Python is a general purpose, very flexible and useful programming language. It is used pretty extensively in scientific computing.

dan wu: wu12345@gmail.com Let me know when we're meeting

- Benji: bzusman@gmail.com 

-Keegan keegan.hines@gmail.com

-Christa (maybe- I'm competent at the very basics, but could still use some help)

- Riccardo: fusaroli@gmail.com

- Oleksandr: krystoferivanov@gmail.com

- Nona: nona.karalashvili@gmail.com

- Xiaoli: xiaolidong2008@gmail.com

- Abby: Abbyhorn@Mit.edu

- Marco: maduenase@gmail.com

- Nick: goudemand at pim dot uzh dot ch

- Fabio: fabio.cresto-aleina@zmaw.de

- Joanne: joannerodrigues@berkeley.edu

- Hide: hi55 at cornell dot edu

- Priya: iitm.priya@gmail.com

- Miguel: miguel.lurgi@icm.csic.es

- Oscar: opatters@asu.edu

- Vanessa: vanferdi at gmail dot com

- Georg G: gmg at stat dot cmu dot edu dot notthelastpart

===Information Theory===
Interested in turning your data into bits, or seeing how the bits over there are related to the bits over here? If so, sign up below.

- Matteo

- Benji: bzusman@gmail.com

-Keegan keegan.hines@gmail.com

-Riccardo

-Christa

- Katrien

- Xiaoli

- Abby

- Jasmeen

- Hide

- Sanith

- Priya

- Georg W.

- Piotr

- Miguel

- Oscar

- Vanessa

- Nona

- Georg G.

===Computational Mechanics===
If you'd like to know more about epsilon machines, measures of complexity, how to go from a map to a machine, i'm happy to discuss it all. 
- Matteo

Yes please! --Chloe

-Keegan keegan.hines@gmail.com

-Christa

-Xiaoli

-Jasmeen

-Hide

-Sanith

- Priya

- Georg W.

-Piotr

-Ian

- Miguel

- Oscar

- Abby

- Georg G.

==Order Book Dynamics: Learn how to trade in 15min==

--I'm happy to repeat this -just get in touch with me.--

If you are curious about how stocks trade and want to try your luck, I'll
be going over some of the basics with a hands-on example.

Meet at 7.30pm in main lecture hall Thursday June 7th. Please make sure
to bring your laptop.

Sanith

==Update==

Hi guys

I guess the mail lecture hall is free at 6.30 pm and so we can meet there. I have a small talk through the idea and then maybe we can try out getting bifurcation plots for one or two systems. I use software written in MATLAB for the demo but the idea can be implemented in any software.

Here's a link to the [[software for numerical continuation|http://twr.cs.kuleuven.be//research/software/delay/notice.shtml]]. This software can handle systems with time delays and can be used to obtain the bifurcation behaviour.

(1) Please download the software DDE-BIFTOOL and unzip.

(2) Within the folder, you will find another zipped folder in small case ‘ddebiftool’. Please unzip this into a folder with the same name

(3) Add the location of the folder to the path of MATLAB.
I have also sent out a mail with a zipped folder containing files to get a bifurcation plot for a Rijke tube system.
Do let me know if anyone did not get this.
See you there!

Priya

==An easier way to get a bifurcation plot==

Hey guys
I have been working in the past in obtaining bifurcation plots for different physical systems. There's a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called ''numerical continuation'' and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at '''iitm.priya@gmail.com''' or sign up below.
[[User:Priya|Priya]]

- [[Ryan James|Ryan]] is interested in this. 
- Riccardo is interested in this. 
- Vikram is interested in this. 
- Matteo is interested in this. 
- Hide is interested in this. 
- Katrien wants to hear more about this. 
- Cameron is interested in this and would like to see [http://itunes.apple.com/us/app/xpp/id433859546?mt=8 this] in action if anyone has an iPad. 
- Oscar is interested in this. 
- Charlie is interested in this. (I've done this once for a paper.) 
- Georg W. is interested in this 

==Using Tisean on R on OS X==
first install TISEAN, like you've done already. Make sure R is up to date (v 2.15).
you can try to install RTisean from CRAN
install.packages("RTisean"); library(RTisean); henon()
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-
Solution:
remove.packages("RTisean")
restart R
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n
install it, it changes line 74 of nativeTISEAN.R which has some problems with file handling
If you are golden, then:
> henon()
V1 V2
[1,] -0.1232481 -1.030383

Complex Systems Summer School 2012-Tutorials

2012-06-15T19:45:56Z

Inamine: /* Markov Chain Monte Carlo */

{{Complex Systems Summer School 2012}}

CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials.

Also, please post requests for tutorials here.

==Markov Chain Monte Carlo==
If anyone is interested in talking more about Bayesian methods and MCMC implementation, I'd be happy to put something together. - Keegan

-Hide is interested in this!

==Python, Computational Mechanics, and Information Theory==

There has been interest in more discussion on a number of topics, and so i'm offering to have evening discussions on them. please sign up below so that i can get a feel for the number of people who would be attending. also, please put a preference for what day it should be.

===Python===
Sign up below if you'd like an introduction to basic python programming. Python is a general purpose, very flexible and useful programming language. It is used pretty extensively in scientific computing.

dan wu: wu12345@gmail.com Let me know when we're meeting

- Benji: bzusman@gmail.com 

-Keegan keegan.hines@gmail.com

-Christa (maybe- I'm competent at the very basics, but could still use some help)

- Riccardo: fusaroli@gmail.com

- Oleksandr: krystoferivanov@gmail.com

- Nona: nona.karalashvili@gmail.com

- Xiaoli: xiaolidong2008@gmail.com

- Abby: Abbyhorn@Mit.edu

- Marco: maduenase@gmail.com

- Nick: goudemand at pim dot uzh dot ch

- Joanne: joannerodrigues@berkeley.edu

- Hide: hi55 at cornell dot edu

- Priya: iitm.priya@gmail.com

- Miguel: miguel.lurgi@icm.csic.es

- Oscar: opatters@asu.edu

===Information Theory===
Interested in turning your data into bits, or seeing how the bits over there are related to the bits over here? If so, sign up below. 
- Matteo

- Benji: bzusman@gmail.com

-Keegan keegan.hines@gmail.com

-Riccardo

-Christa

- Katrien

- Xiaoli

- Abby

- Jasmeen

- Hide

- Sanith

- Priya

- Georg W.

- Piotr

- Miguel

- Oscar
===Computational Mechanics===
If you'd like to know more about epsilon machines, measures of complexity, how to go from a map to a machine, i'm happy to discuss it all. 
- Matteo

Yes please! --Chloe

-Keegan keegan.hines@gmail.com

-Christa

-Xiaoli

-Jasmeen

-Hide

-Sanith

- Priya

- Georg W.

-Piotr

-Ian

- Miguel

- Oscar

- Abby

==Order Book Dynamics: Learn how to trade in 15min==

--I'm happy to repeat this -just get in touch with me.--

If you are curious about how stocks trade and want to try your luck, I'll
be going over some of the basics with a hands-on example.

Meet at 7.30pm in main lecture hall Thursday June 7th. Please make sure
to bring your laptop.

Sanith

==Update==

Hi guys

I guess the mail lecture hall is free at 6.30 pm and so we can meet there. I have a small talk through the idea and then maybe we can try out getting bifurcation plots for one or two systems. I use software written in MATLAB for the demo but the idea can be implemented in any software.

Here's a link to the [[software for numerical continuation|http://twr.cs.kuleuven.be//research/software/delay/notice.shtml]]. This software can handle systems with time delays and can be used to obtain the bifurcation behaviour.

(1) Please download the software DDE-BIFTOOL and unzip.

(2) Within the folder, you will find another zipped folder in small case ‘ddebiftool’. Please unzip this into a folder with the same name

(3) Add the location of the folder to the path of MATLAB.
I have also sent out a mail with a zipped folder containing files to get a bifurcation plot for a Rijke tube system.
Do let me know if anyone did not get this.
See you there!

Priya

==An easier way to get a bifurcation plot==

Hey guys
I have been working in the past in obtaining bifurcation plots for different physical systems. There's a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called ''numerical continuation'' and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at '''iitm.priya@gmail.com''' or sign up below.
[[User:Priya|Priya]]

- [[Ryan James|Ryan]] is interested in this. 
- Riccardo is interested in this. 
- Vikram is interested in this. 
- Matteo is interested in this. 
- Hide is interested in this. 
- Katrien wants to hear more about this. 
- Cameron is interested in this and would like to see [http://itunes.apple.com/us/app/xpp/id433859546?mt=8 this] in action if anyone has an iPad. 
- Oscar is interested in this. 
- Charlie is interested in this. (I've done this once for a paper.) 
- Georg W. is interested in this 

==Using Tisean on R on OS X==
first install TISEAN, like you've done already. Make sure R is up to date (v 2.15).
you can try to install RTisean from CRAN
install.packages("RTisean"); library(RTisean); henon()
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-
Solution:
remove.packages("RTisean")
restart R
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n
install it, it changes line 74 of nativeTISEAN.R which has some problems with file handling
If you are golden, then:
> henon()
V1 V2
[1,] -0.1232481 -1.030383

Complex Systems Summer School 2012-Tutorials

2012-06-14T00:43:31Z

Inamine: /* Computational Mechanics */

{{Complex Systems Summer School 2012}}

CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials.

Also, please post requests for tutorials here.

==Python, Computational Mechanics, and Information Theory==

There has been interest in more discussion on a number of topics, and so i'm offering to have evening discussions on them. please sign up below so that i can get a feel for the number of people who would be attending. also, please put a preference for what day it should be.

===Python===
Sign up below if you'd like an introduction to basic python programming. Python is a general purpose, very flexible and useful programming language. It is used pretty extensively in scientific computing.

dan wu: wu12345@gmail.com Let me know when we're meeting

- Benji: bzusman@gmail.com 

-Keegan

-Christa (maybe- I'm competent at the very basics, but could still use some help)

-Riccardo

- Oleksandr: krystoferivanov@gmail.com

- Nona: nona.karalashvili@gmail.com

- Xiaoli: xiaolidong2008@gmail.com

- Abby: Abbyhorn@Mit.edu

- Marco: maduenase@gmail.com

- Nick: goudemand at pim dot uzh dot ch

- Hide: hi55 at cornell dot edu

===Information Theory===
Interested in turning your data into bits, or seeing how the bits over there are related to the bits over here? If so, sign up below. 
- Matteo

- Benji: bzusman@gmail.com

-Keegan

-Riccardo

-Christa

- Katrien

- Xiaoli

- Abby

- Jasmeen

- Hide

===Computational Mechanics===
If you'd like to know more about epsilon machines, measures of complexity, how to go from a map to a machine, i'm happy to discuss it all. 
- Matteo

Yes please! --Chloe

-Keegan

-Christa

-Xiaoli

-Jasmeen

-Hide

==Order Book Dynamics: Learn how to trade in 15min==

--I'm happy to repeat this -just get in touch with me.--

If you are curious about how stocks trade and want to try your luck, I'll
be going over some of the basics with a hands-on example.

Meet at 7.30pm in main lecture hall Thursday June 7th. Please make sure
to bring your laptop.

Sanith

==An easier way to get a bifurcation plot==

Hey guys
I have been working in the past in obtaining bifurcation plots for different physical systems. There's a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called ''numerical continuation'' and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at '''iitm.priya@gmail.com''' or sign up below.
[[User:Priya|Priya]]

- [[Ryan James|Ryan]] is interested in this. 
- Riccardo is interested in this. 
- Vikram is interested in this. 
- Matteo is interested in this. 
- Hide is interested in this. 
- Katrien wants to hear more about this. 
- Cameron is interested in this and would like to see [http://itunes.apple.com/us/app/xpp/id433859546?mt=8 this] in action if anyone has an iPad. 
- Oscar is interested in this. 
- Charlie is interested in this. (I've done this once for a paper.) 

==Using Tisean on R on OS X==
first install TISEAN, like you've done already. Make sure R is up to date (v 2.15).
you can try to install RTisean from CRAN
install.packages("RTisean"); library(RTisean); henon()
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-
Solution:
remove.packages("RTisean")
restart R
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n
install it, it changes line 74 of nativeTISEAN.R which has some problems with file handling
If you are golden, then:
> henon()
V1 V2
[1,] -0.1232481 -1.030383

Complex Systems Summer School 2012-Tutorials

2012-06-14T00:43:16Z

Inamine: /* Information Theory */

{{Complex Systems Summer School 2012}}

CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials.

Also, please post requests for tutorials here.

==Python, Computational Mechanics, and Information Theory==

There has been interest in more discussion on a number of topics, and so i'm offering to have evening discussions on them. please sign up below so that i can get a feel for the number of people who would be attending. also, please put a preference for what day it should be.

===Python===
Sign up below if you'd like an introduction to basic python programming. Python is a general purpose, very flexible and useful programming language. It is used pretty extensively in scientific computing.

dan wu: wu12345@gmail.com Let me know when we're meeting

- Benji: bzusman@gmail.com 

-Keegan

-Christa (maybe- I'm competent at the very basics, but could still use some help)

-Riccardo

- Oleksandr: krystoferivanov@gmail.com

- Nona: nona.karalashvili@gmail.com

- Xiaoli: xiaolidong2008@gmail.com

- Abby: Abbyhorn@Mit.edu

- Marco: maduenase@gmail.com

- Nick: goudemand at pim dot uzh dot ch

- Hide: hi55 at cornell dot edu

===Information Theory===
Interested in turning your data into bits, or seeing how the bits over there are related to the bits over here? If so, sign up below. 
- Matteo

- Benji: bzusman@gmail.com

-Keegan

-Riccardo

-Christa

- Katrien

- Xiaoli

- Abby

- Jasmeen

- Hide

===Computational Mechanics===
If you'd like to know more about epsilon machines, measures of complexity, how to go from a map to a machine, i'm happy to discuss it all. 
- Matteo

Yes please! --Chloe

-Keegan

-Christa

-Xiaoli

-Jasmeen

==Order Book Dynamics: Learn how to trade in 15min==

--I'm happy to repeat this -just get in touch with me.--

If you are curious about how stocks trade and want to try your luck, I'll
be going over some of the basics with a hands-on example.

Meet at 7.30pm in main lecture hall Thursday June 7th. Please make sure
to bring your laptop.

Sanith

==An easier way to get a bifurcation plot==

Hey guys
I have been working in the past in obtaining bifurcation plots for different physical systems. There's a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called ''numerical continuation'' and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at '''iitm.priya@gmail.com''' or sign up below.
[[User:Priya|Priya]]

- [[Ryan James|Ryan]] is interested in this. 
- Riccardo is interested in this. 
- Vikram is interested in this. 
- Matteo is interested in this. 
- Hide is interested in this. 
- Katrien wants to hear more about this. 
- Cameron is interested in this and would like to see [http://itunes.apple.com/us/app/xpp/id433859546?mt=8 this] in action if anyone has an iPad. 
- Oscar is interested in this. 
- Charlie is interested in this. (I've done this once for a paper.) 

==Using Tisean on R on OS X==
first install TISEAN, like you've done already. Make sure R is up to date (v 2.15).
you can try to install RTisean from CRAN
install.packages("RTisean"); library(RTisean); henon()
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-
Solution:
remove.packages("RTisean")
restart R
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n
install it, it changes line 74 of nativeTISEAN.R which has some problems with file handling
If you are golden, then:
> henon()
V1 V2
[1,] -0.1232481 -1.030383

Complex Systems Summer School 2012-Tutorials

2012-06-14T00:42:36Z

Inamine: /* Python */

{{Complex Systems Summer School 2012}}

CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials.

Also, please post requests for tutorials here.

==Python, Computational Mechanics, and Information Theory==

There has been interest in more discussion on a number of topics, and so i'm offering to have evening discussions on them. please sign up below so that i can get a feel for the number of people who would be attending. also, please put a preference for what day it should be.

===Python===
Sign up below if you'd like an introduction to basic python programming. Python is a general purpose, very flexible and useful programming language. It is used pretty extensively in scientific computing.

dan wu: wu12345@gmail.com Let me know when we're meeting

- Benji: bzusman@gmail.com 

-Keegan

-Christa (maybe- I'm competent at the very basics, but could still use some help)

-Riccardo

- Oleksandr: krystoferivanov@gmail.com

- Nona: nona.karalashvili@gmail.com

- Xiaoli: xiaolidong2008@gmail.com

- Abby: Abbyhorn@Mit.edu

- Marco: maduenase@gmail.com

- Nick: goudemand at pim dot uzh dot ch

- Hide: hi55 at cornell dot edu

===Information Theory===
Interested in turning your data into bits, or seeing how the bits over there are related to the bits over here? If so, sign up below. 
- Matteo

- Benji: bzusman@gmail.com

-Keegan

-Riccardo

-Christa

- Katrien

- Xiaoli

- Abby

- Jasmeen

===Computational Mechanics===
If you'd like to know more about epsilon machines, measures of complexity, how to go from a map to a machine, i'm happy to discuss it all. 
- Matteo

Yes please! --Chloe

-Keegan

-Christa

-Xiaoli

-Jasmeen

==Order Book Dynamics: Learn how to trade in 15min==

--I'm happy to repeat this -just get in touch with me.--

If you are curious about how stocks trade and want to try your luck, I'll
be going over some of the basics with a hands-on example.

Meet at 7.30pm in main lecture hall Thursday June 7th. Please make sure
to bring your laptop.

Sanith

==An easier way to get a bifurcation plot==

Hey guys
I have been working in the past in obtaining bifurcation plots for different physical systems. There's a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called ''numerical continuation'' and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at '''iitm.priya@gmail.com''' or sign up below.
[[User:Priya|Priya]]

- [[Ryan James|Ryan]] is interested in this. 
- Riccardo is interested in this. 
- Vikram is interested in this. 
- Matteo is interested in this. 
- Hide is interested in this. 
- Katrien wants to hear more about this. 
- Cameron is interested in this and would like to see [http://itunes.apple.com/us/app/xpp/id433859546?mt=8 this] in action if anyone has an iPad. 
- Oscar is interested in this. 
- Charlie is interested in this. (I've done this once for a paper.) 

==Using Tisean on R on OS X==
first install TISEAN, like you've done already. Make sure R is up to date (v 2.15).
you can try to install RTisean from CRAN
install.packages("RTisean"); library(RTisean); henon()
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-
Solution:
remove.packages("RTisean")
restart R
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n
install it, it changes line 74 of nativeTISEAN.R which has some problems with file handling
If you are golden, then:
> henon()
V1 V2
[1,] -0.1232481 -1.030383

Complex Systems Summer School 2012-Tutorials

2012-06-07T19:09:13Z

Inamine: /* An easier way to get a bifurcation plot */

{{Complex Systems Summer School 2012}}

CSSS participants come from a wide range of disciplines. Participants are encouraged to share their knowledge by organizing their own tutorials.

Also, please post requests for tutorials here.

==Order Book Dynamics: Learn how to trade in 15min==

If you are curious about how stocks trade and want to try your luck, I'll
be going over some of the basics with a hands-on example.

Meet at 6.30pm in main lecture hall Thursday June 7th. Please make sure
to bring your laptop.

Sanith

==An easier way to get a bifurcation plot==

Hey guys
I have been working in the past in obtaining bifurcation plots for different physical systems. There's a better way to get these pictures instead of getting the evolution at every parameter value of interest. This is called ''numerical continuation'' and basically involves tracking a curve. I plan to give a informal talk on how to do this and maybe even a demo on applying this technique on 14th June at 6.30 pm. Do mail me if you are interested at '''iitm.priya@gmail.com''' or sign up below.
[[User:Priya|Priya]]

- [[Ryan James|Ryan]] is interested in this. 
- Riccardo is interested in this. 
- Vikram is interested in this. 
- Hide is interested in this. 

==Using Tisean on R on OS X==
first install TISEAN, like you've done already. Make sure R is up to date (v 2.15).
you can try to install RTisean from CRAN
install.packages("RTisean"); library(RTisean); henon()
But me and Dave both got an error about some bad file name, something about con and something about a long path involving -Tmp-
Solution:
remove.packages("RTisean")
restart R
download this: http://cl.ly/0I0b2P2L311y1q0q0y0n
install it, it changes line 74 of nativeTISEAN.R which has some problems with file handling
If you are golden, then:
> henon()
V1 V2
[1,] -0.1232481 -1.030383

Bandelier Trip 2012

2012-06-07T00:45:38Z

Inamine: /* Juniper's Car: 4 seats */

{{Complex Systems Summer School 2012}}

Please sign up here so we know who's going. 
Also: If you have a car, please let us know. The more cars, the more people. 

We'll meet Saturday at 10:00am in the parking circle.

Please remember to bring a hat, sunscreen, water, hiking shoes, and anything else you'll need for a day out in the field.

==Cars:==

===Tom's Sedan: 4 seats===
1. [[Nicholas Allgaier]] 

2. Vikram Vijayaraghavan 

3. Katrien Beuls 

4. Riccardo Fusaroli 

===John Paul's Camry: 4 (maybe 5) seats===

1. [[John Paul]] 

2. [[Matteo Chinazzi]] 

3. [[Chloe Lewis]] 

4. [[Xue Feng]] 

5. [[Joanne Rodrigues]] 

===Juniper's Car: 4 seats===

1. Jasmeen Kanwal

2. Sarah Tweedt

3. Mark Longo

4. Hide Inamine

===[http://tuvalu.santafe.edu/events/workshops/index.php/Christa_Brelsford Christa]'s Car: 4 (maybe 5) seats===

1. Christa

2. Nicolas Goudemand

3. Marco

4. [http://tuvalu.santafe.edu/events/workshops/index.php/Xin_Lu Xin]

5(middle seat in a 2 door civic).

===STILL NEEDS A SEAT!===
1.

2.

3.

Alfred Hubler's Nonlinear Dynamics Lab 2012

2012-06-03T18:44:47Z

Inamine: /* Monday, June 11, 6:00pm */

{{Complex Systems Summer School 2012}}

==Thursday, June 7, 6:00pm==

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==Friday, June 8 7:00am==
PLEASE NOTE THAT THIS IS AN EARLY MORNING CLASS! 
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==Monday, June 11, 6:00pm==
1. Hidetoshi Inamine 
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==Tuesday, June 12, 6:00pm==
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Alfred Hubler's Nonlinear Dynamics Lab 2012

2012-06-03T18:44:11Z

Inamine: /* Monday, June 11, 6:00pm */

{{Complex Systems Summer School 2012}}

==Thursday, June 7, 6:00pm==

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==Friday, June 8 7:00am==
PLEASE NOTE THAT THIS IS AN EARLY MORNING CLASS! 
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==Monday, June 11, 6:00pm==
1. Hidetoshi Inamine
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==Tuesday, June 12, 6:00pm==
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Hidetoshi Inamine

2012-05-30T22:10:28Z

Inamine: Created page with 'Hello all, my name is Hide and I'm a first year graduate student studying Ecology and Evolutionary Biology at Cornell. I did my undergraduate study at the University of Chicago, …'

Hello all, my name is Hide and I'm a first year graduate student studying Ecology and Evolutionary Biology at Cornell. I did my undergraduate study at the University of Chicago, but am originally from Okinawa, Japan.

On the broadest level, I am interested in theoretical biology. On a narrower level, I am interested in feedback loop between ecological and evolutionary processes (eco-evolutionary dynamics), especially in host-pathogen system where the evolutionary timescale of the pathogen is comparable to its ecological timescale. More specifically, I would like to investigate (in silico) how different population structures influence evolutionary trajectories of the pathogens.

I am currently in the process of transforming my interests into a viable project. Fingers crossed.

I enjoy any and every academic activity, and am really looking forward to the interdisciplinary experience that the program has to offer.